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Details for NP_440116.1_5

Name NP_440116.1_5
Length 18
Regular expression CTTG[GTC]C[GT]ATC[GT][GA][ACG]T[CT][AG][GC]T
Central Yes

Motif logo

Genes containing this motif

367 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0611 Reverse -306 -323 9.08529 0.155
slr1319 Forward -56 -39 3.0871 0.249
sll1202 Forward -340 -323 14.8868 0.0601
sll1400 Reverse -326 -343 4.56207 0.192
ssl2733 Reverse -99 -116 4.56207 0.192
sll1395 Reverse -221 -238 7.512 0.155
sll1394 Reverse -233 -250 2.98877 0.249
sll1393 Reverse -39 -56 2.79211 0.255
slr1115 Reverse -31 -48 2.49712 0.267
slr1117 Reverse -241 -258 6.52869 0.167
sll1060 Reverse -348 -365 2.89044 0.252
ssl2069 Reverse -161 -178 2.89044 0.252
ssr1853 Forward -108 -91 2.89044 0.252
slr1128 Forward -384 -367 8.20031 0.155
sll0716 Forward -304 -287 13.1169 0.09
sll0712 Reverse -137 -154 1.90713 0.291
sll0704 Reverse -70 -87 2.59545 0.262
slr0732 Forward -106 -89 2.59545 0.262
sll0703 Forward -371 -354 12.9202 0.09
slr0743 Reverse -313 -330 2.00546 0.285
slr0743a Reverse -136 -153 5.9387 0.172
sll1322 Forward -45 -28 4.26707 0.209
sll1319 Reverse -262 -279 5.15205 0.176
slr1097 Reverse -94 -111 10.3636 0.139
slr1100 Forward -363 -346 7.41366 0.155
sll1036 Forward -315 -298 4.16874 0.214
slr1109 Reverse -336 -353 3.38209 0.233
slr1778 Reverse -276 -293 9.77361 0.147
slr1793 Forward -362 -345 10.9536 0.129
sll1659 Reverse -76 -93 6.43035 0.167
sll1658 Reverse -92 -109 12.5269 0.09
slr1799 Forward -54 -37 12.5269 0.09
sll1192 Forward -255 -238 7.61033 0.155
sll1191 Reverse -299 -316 23.6383 0.0128
ssr2153 Reverse -380 -397 7.61033 0.155
slr1306 Reverse -132 -149 2.98877 0.249
sll1187 Forward -25 -8 3.0871 0.249
sll1186 Reverse -319 -336 4.95539 0.176
slr0962 Forward -22 -5 4.07041 0.218
slr0971 Reverse -284 -301 5.54538 0.176
sll0927 Forward -312 -295 5.15205 0.176
slr0985 Forward -177 -160 2.49712 0.267
slr1615 Forward -284 -267 6.03703 0.171
slr1068 Forward -196 -179 3.77542 0.225
sll1023 Reverse -311 -328 4.95539 0.176
sll1021 Reverse -170 -187 5.15205 0.176
slr0682 Reverse -103 -120 3.97208 0.222
slr0689 Reverse -131 -148 3.97208 0.222
ssl2923 Reverse -232 -249 1.71047 0.298
ssl2922 Reverse -4 -21 1.71047 0.298
sll1011 Forward -279 -262 5.25038 0.176
slr1050 Reverse -45 -62 5.25038 0.176
sll1009 Forward -325 -308 7.41366 0.155
slr1055 Reverse -163 -180 7.41366 0.155
sll1005 Forward -340 -323 5.44704 0.176
sll1643 Reverse -310 -327 14.7885 0.0612
sll1643 Forward -143 -126 4.6604 0.188
slr1762 Reverse -101 -118 4.6604 0.188
slr1763 Forward -41 -24 4.16874 0.214
ssr2962 Forward -392 -375 5.15205 0.176
sll1640 Forward -319 -302 7.512 0.155
slr1849 Reverse -376 -393 15.7718 0.0544
ssr3452 Forward -394 -377 8.98696 0.155
sll1941 Reverse -301 -318 2.49712 0.267
slr2042 Forward -159 -142 2.49712 0.267
sll1940 Forward -347 -330 3.38209 0.233
ssr3465 Reverse -366 -383 3.38209 0.233
slr2048 Reverse -82 -99 2.10379 0.282
slr1911 Reverse -48 -65 2.20212 0.279
sll1830 Forward -224 -207 12.8219 0.09
sll0994 Reverse -362 -379 3.77542 0.225
slr1024 Reverse -288 -305 2.30045 0.276
slr1025 Reverse -141 -158 4.56207 0.192
slr1032 Forward -379 -362 3.18543 0.242
slr1034 Forward -348 -331 3.18543 0.242
slr1034 Forward -120 -103 2.30045 0.276
slr1035 Forward -260 -243 5.84037 0.174
sll0984 Forward -363 -346 5.64371 0.176
sll0980 Reverse -290 -307 3.38209 0.233
slr1377 Reverse -84 -101 15.3785 0.0567
ssr2317 Forward -364 -347 3.77542 0.225
slr1385 Reverse -177 -194 3.67709 0.225
sll1290 Reverse -319 -336 25.1132 0.0128
slr1395 Reverse -382 -399 3.67709 0.225
sll1574 Reverse -196 -213 12.6252 0.09
sll1926 Reverse -155 -172 8.10198 0.155
sll1917 Reverse -119 -136 3.77542 0.225
slr2026 Reverse -256 -273 4.85706 0.178
slr1140 Reverse -265 -282 16.0668 0.0544
sll1077 Reverse -321 -338 3.38209 0.233
sll1077 Reverse -246 -263 2.59545 0.262
slr1142 Forward -116 -99 3.38209 0.233
slr1142 Forward -191 -174 2.59545 0.262
ssl3446 Reverse -71 -88 3.48043 0.233
sll1804 Reverse -155 -172 4.85706 0.178
sll1800 Forward -360 -343 3.18543 0.242
slr1902 Reverse -237 -254 7.512 0.155
slr1902 Forward -252 -235 2.69378 0.26
sll1789 Forward -74 -57 3.18543 0.242
sll1118 Reverse -369 -386 6.33202 0.167
slr1198 Forward -149 -132 6.33202 0.167
slr1203 Forward -200 -183 12.9202 0.09
sll1971 Reverse -308 -325 6.52869 0.167
sll1971 Forward -323 -306 3.57876 0.229
sll1965 Reverse -162 -179 8.49531 0.155
slr2076 Forward -369 -352 8.49531 0.155
ssl3712 Reverse -252 -269 2.79211 0.255
sll1745 Reverse -60 -77 6.33202 0.167
ssl3335 Forward -361 -344 5.74204 0.176
ssl3335 Reverse -88 -105 2.98877 0.249
sll1737 Forward -104 -87 15.6735 0.0544
slr1828 Reverse -146 -163 15.6735 0.0544
sll1726 Forward -309 -292 3.57876 0.229
sll1725 Forward -75 -58 2.89044 0.252
slr1535 Forward -303 -286 16.8534 0.0499
sll1464 Reverse -349 -366 1.8088 0.297
slr1550 Forward -212 -195 3.38209 0.233
sll1452 Forward -264 -247 3.97208 0.222
slr1751 Forward -289 -272 9.67528 0.148
slr1220 Reverse -6 -23 7.512 0.155
sll1143 Reverse -261 -278 3.67709 0.225
sll1129 Forward -298 -281 5.05372 0.176
ssr2061 Reverse -107 -124 5.05372 0.176
sll1127 Reverse -143 -160 15.7718 0.0544
slr1239 Forward -58 -41 15.7718 0.0544
slr1240 Forward -339 -322 4.95539 0.176
slr1435 Reverse -323 -340 2.00546 0.285
slr1440 Reverse -363 -380 12.6252 0.09
ssr2422 Forward -331 -314 6.23369 0.169
sll1354 Reverse -319 -336 6.03703 0.171
sll1280 Reverse -203 -220 3.38209 0.233
slr1356 Forward -191 -174 3.38209 0.233
sll1274 Reverse -107 -124 3.97208 0.222
slr1366 Forward -56 -39 2.20212 0.279
slr0878 Reverse -122 -139 7.61033 0.155
slr0878 Reverse -225 -242 1.71047 0.298
ssl1633 Reverse -100 -117 5.15205 0.176
sll0871 Forward -230 -213 17.1484 0.0499
slr0884 Reverse -86 -103 17.1484 0.0499
slr0889 Forward -225 -208 5.54538 0.176
slr0891 Forward -231 -214 4.07041 0.218
sll1317 Reverse -353 -370 4.07041 0.218
slr1407 Reverse -317 -334 5.05372 0.176
slr1856 Reverse -47 -64 5.15205 0.176
slr1859 Reverse -323 -340 2.98877 0.249
sll1771 Reverse -282 -299 8.29864 0.155
sll1768 Forward -208 -191 5.9387 0.172
sll1755 Forward -194 -177 7.11867 0.161
slr1887 Forward -142 -125 6.43035 0.167
sll2006 Forward -229 -212 6.72535 0.167
sll1708 Reverse -266 -283 4.95539 0.176
sll1694 Reverse -81 -98 1.8088 0.297
slr1818 Forward -163 -146 5.44704 0.176
sll1687 Reverse -154 -171 3.18543 0.242
slr1732 Reverse -168 -185 5.44704 0.176
slr1735 Forward -103 -86 6.52869 0.167
slr1736 Reverse -209 -226 4.46374 0.196
sll1620 Reverse -53 -70 14.0018 0.0693
slr1739 Forward -201 -184 14.0018 0.0693
slr1742 Forward -320 -303 7.61033 0.155
slr1746 Reverse -174 -191 6.03703 0.171
sll0848 Forward -121 -104 14.1985 0.0693
sll0839 Reverse -104 -121 2.79211 0.255
slr1254 Forward -130 -113 23.9333 0.0128
sll1956 Reverse -383 -400 1.71047 0.298
slr2003 Reverse -320 -337 3.87375 0.223
sll1615 Forward -246 -229 3.77542 0.225
slr1719 Reverse -310 -327 2.10379 0.282
slr1731 Reverse -173 -190 5.15205 0.176
sll0248 Reverse -125 -142 4.46374 0.196
slr0267 Forward -108 -91 2.98877 0.249
slr0270 Forward -136 -119 11.4452 0.117
ssl0452 Reverse -261 -278 6.13536 0.17
ssl0452 Forward -276 -259 2.98877 0.249
slr0271 Forward -323 -306 6.13536 0.17
slr0271 Reverse -308 -325 2.98877 0.249
sll0243 Forward -83 -66 2.59545 0.262
sll0236 Reverse -377 -394 2.10379 0.282
slr2084 Forward -183 -166 2.59545 0.262
slr2087 Forward -353 -336 4.6604 0.188
slr2099 Forward -383 -366 6.82368 0.167
slr2099 Reverse -368 -385 6.03703 0.171
slr2102 Reverse -34 -51 5.25038 0.176
slr1517 Forward -345 -328 4.85706 0.178
sll2001 Reverse -13 -30 2.30045 0.276
ssr3570 Forward -371 -354 2.30045 0.276
slr2125 Forward -310 -293 6.52869 0.167
slr2128 Forward -220 -203 12.8219 0.09
slr2131 Forward -207 -190 11.5436 0.114
slr2131 Reverse -332 -349 3.38209 0.233
sll0819 Forward -393 -376 5.44704 0.176
slr0813 Forward -359 -342 14.9851 0.0596
ssr1391 Forward -48 -31 21.9666 0.0248
slr0820 Reverse -163 -180 11.2486 0.122
ssl1498 Forward -228 -211 5.05372 0.176
sll1251 Reverse -265 -282 5.44704 0.176
ssl2471 Reverse -311 -328 3.67709 0.225
slr1349 Forward -132 -115 8.39697 0.155
slr1349 Forward -350 -333 5.54538 0.176
slr1350 Reverse -250 -267 4.95539 0.176
ssl3549 Reverse -335 -352 8.29864 0.155
sll1883 Reverse -95 -112 8.98696 0.155
sll1880 Forward -304 -287 6.52869 0.167
sll1878 Forward -229 -212 15.2801 0.0567
slr1468 Reverse -179 -196 6.23369 0.169
sll1369 Reverse -81 -98 2.89044 0.252
sll1178 Forward -93 -76 7.61033 0.155
slr1266 Reverse -37 -54 7.61033 0.155
slr1278 Reverse -361 -378 17.4434 0.0499
slr1278 Forward -331 -314 12.0352 0.103
sll1172 Forward -187 -170 3.67709 0.225
slr1279 Reverse -96 -113 3.67709 0.225
ssl2153 Forward -154 -137 3.38209 0.233
ssl2148 Forward -149 -132 7.80699 0.155
slr1164 Reverse -153 -170 7.80699 0.155
slr1670 Forward -159 -142 3.38209 0.233
ssr2799 Reverse -150 -167 4.46374 0.196
sll1561 Reverse -11 -28 8.7903 0.155
slr1681 Forward -339 -322 8.7903 0.155
slr1690 Forward -28 -11 3.77542 0.225
slr0952 Reverse -317 -334 8.39697 0.155
sll1537 Forward -353 -336 5.15205 0.176
slr1627 Reverse -125 -142 5.15205 0.176
slr1643 Forward -88 -71 2.79211 0.255
ssr2754 Forward -107 -90 10.1669 0.14
sll1521 Reverse -335 -352 10.3636 0.139
slr0447 Reverse -321 -338 3.57876 0.229
slr0280 Reverse -106 -123 10.0686 0.141
sll0264 Reverse -53 -70 5.9387 0.172
sll0261 Reverse -182 -199 11.6419 0.113
slr0284 Forward -117 -100 11.6419 0.113
sll0260 Reverse -332 -349 4.85706 0.178
slr0287 Forward -247 -230 4.85706 0.178
sll0364 Reverse -285 -302 12.6252 0.09
sll0361 Forward -121 -104 7.31533 0.155
slr0406 Reverse -80 -97 2.10379 0.282
sll0148 Forward -32 -15 7.217 0.158
slr0162 Reverse -314 -331 13.1169 0.09
slr0164 Reverse -272 -289 2.59545 0.262
sll1865 Reverse -6 -23 9.08529 0.155
slr1926 Forward -42 -25 2.00546 0.285
slr1929 Forward -121 -104 4.46374 0.196
sll1854 Forward -334 -317 11.9369 0.105
sll1854 Forward -166 -149 6.13536 0.17
ssr3300 Forward -361 -344 1.71047 0.298
slr1942 Reverse -138 -155 5.74204 0.176
slr1942 Reverse -237 -254 2.89044 0.252
slr1943 Reverse -115 -132 2.20212 0.279
slr1951 Reverse -336 -353 3.67709 0.225
slr0326 Forward -111 -94 6.72535 0.167
sll0297 Reverse -90 -107 7.02034 0.164
sll0162 Reverse -113 -130 4.95539 0.176
slr0179 Forward -122 -105 4.95539 0.176
sml0001 Forward -204 -187 4.95539 0.176
slr0381 Reverse -49 -66 5.64371 0.176
sll0329 Forward -349 -332 2.00546 0.285
sll0771 Forward -242 -225 6.43035 0.167
slr0774 Reverse -56 -73 6.43035 0.167
slr1003 Forward -363 -346 2.59545 0.262
sll0753 Forward -400 -383 5.54538 0.176
slr0342 Forward -303 -286 4.56207 0.192
sll0309 Forward -368 -351 23.6383 0.0128
sll0309 Forward -251 -234 2.20212 0.279
sll0012 Reverse -279 -296 5.15205 0.176
sll0007 Forward -114 -97 3.48043 0.233
slr0220 Forward -370 -353 7.70866 0.155
sll0194 Forward -92 -75 5.15205 0.176
slr0229 Reverse -301 -318 5.15205 0.176
sll0416 Reverse -114 -131 14.4935 0.0644
sll0400 Forward -25 -8 2.10379 0.282
slr0440 Reverse -38 -55 2.10379 0.282
slr0049 Reverse -121 -138 14.3952 0.0644
slr0474 Reverse -248 -265 4.95539 0.176
sml0002 Forward -257 -240 7.90532 0.155
slr0477 Reverse -337 -354 6.23369 0.169
slr0488 Reverse -261 -278 12.4285 0.09
slr0496 Reverse -214 -231 2.30045 0.276
slr0634 Reverse -53 -70 14.3952 0.0644
sll0609 Forward -210 -193 16.9518 0.0499
slr0643 Reverse -257 -274 6.33202 0.167
slr0644 Forward -392 -375 4.95539 0.176
sll0396 Reverse -7 -24 5.15205 0.176
sll0396 Reverse -225 -242 1.71047 0.298
slr0415 Reverse -233 -250 2.20212 0.279
slr0417 Reverse -310 -327 17.1484 0.0499
slr0197 Forward -24 -7 10.2653 0.14
slr0209 Forward -348 -331 2.00546 0.285
slr0904 Forward -129 -112 3.97208 0.222
sll0542 Reverse -360 -377 6.72535 0.167
slr0076 Reverse -73 -90 13.8052 0.075
slr0079 Reverse -340 -357 4.26707 0.209
slr0081 Reverse -242 -259 14.0018 0.0693
slr0082 Forward -392 -375 6.13536 0.17
slr0095 Forward -323 -306 5.25038 0.176
slr0509 Forward -384 -367 3.87375 0.223
slr0514 Forward -293 -276 4.95539 0.176
sll0473 Reverse -173 -190 8.29864 0.155
slr0522 Forward -248 -231 15.9685 0.0544
slr0619 Forward -202 -185 3.77542 0.225
sll0585 Forward -280 -263 12.6252 0.09
sll0108 Forward -328 -311 6.82368 0.167
sll0095 Forward -174 -157 13.4119 0.0846
sll0092 Reverse -102 -119 5.54538 0.176
slr0118 Forward -154 -137 5.54538 0.176
sll0289 Forward -205 -188 14.5918 0.0642
slr0299 Forward -124 -107 13.7068 0.0759
sll0782 Forward -172 -155 3.18543 0.242
sll0775 Forward -128 -111 5.64371 0.176
ssr1169 Reverse -95 -112 5.64371 0.176
slr0701 Reverse -178 -195 5.64371 0.176
sll0737 Reverse -194 -211 3.87375 0.223
sll0041 Forward -25 -8 9.38028 0.155
sll0041 Reverse -155 -172 2.69378 0.26
slr0040 Forward -396 -379 4.07041 0.218
sll0514 Forward -297 -280 3.87375 0.223
slr0529 Reverse -143 -160 3.87375 0.223
sll0509 Reverse -200 -217 10.1669 0.14
sll0504 Forward -352 -335 15.5751 0.0544
slr0927 Forward -337 -320 8.29864 0.155
slr0927 Forward -58 -41 2.30045 0.276
sll0528 Forward -222 -205 21.18 0.0305
slr0557 Forward -295 -278 7.70866 0.155
slr1425 Forward -399 -382 6.52869 0.167
sll1341 Forward -71 -54 2.98877 0.249
slr1451 Forward -138 -121 7.31533 0.155
sll0625 Reverse -175 -192 1.8088 0.297
slr0667 Reverse -139 -156 2.20212 0.279
slr1562 Reverse -188 -205 5.84037 0.174
slr1565 Forward -81 -64 18.7217 0.0499
sll1489 Reverse -186 -203 4.16874 0.214
sll1485 Reverse -250 -267 5.15205 0.176
sll1484 Forward -318 -301 3.87375 0.223
sll1483 Reverse -154 -171 2.89044 0.252
sll1481 Forward -349 -332 12.6252 0.09
sll1470 Forward -30 -13 2.79211 0.255
slr1588 Reverse -199 -216 2.79211 0.255
slr0746 Reverse -360 -377 10.9536 0.129
sll0733 Reverse -187 -204 5.05372 0.176
slr0752 Reverse -317 -334 10.3636 0.139
slr0752 Forward -184 -167 7.41366 0.155
sll0721 Reverse -279 -296 2.00546 0.285
slr1665 Forward -42 -25 2.69378 0.26
ssr2786 Reverse -48 -65 4.6604 0.188
sll0436 Reverse -282 -299 4.85706 0.178
slr1177 Reverse -44 -61 1.90713 0.291
slr1187 Reverse -290 -307 5.25038 0.176
slr0604 Forward -328 -311 3.87375 0.223
slr0609 Forward -125 -108 8.29864 0.155
sll5002 Reverse -170 -187 3.67709 0.225
ssl5015 Reverse -145 -162 7.31533 0.155
slr5021 Reverse -106 -123 7.41366 0.155
ssl5027 Reverse -198 -215 5.84037 0.174
sll5042 Forward -354 -337 2.49712 0.267
slr5051 Forward -358 -341 9.97027 0.142
slr5051 Reverse -208 -225 1.90713 0.291
sll5052 Reverse -221 -238 2.39878 0.274
ssl5070 Reverse -316 -333 3.48043 0.233
slr5073 Reverse -235 -252 6.62702 0.167
ssl5108 Forward -54 -37 3.67709 0.225
slr5111 Reverse -289 -306 6.62702 0.167
ssl5114 Reverse -84 -101 10.4619 0.139
slr5115 Forward -82 -65 10.4619 0.139
slr7011 Forward -235 -218 2.20212 0.279
slr7012 Reverse -296 -313 5.05372 0.176
sll7034 Reverse -59 -76 3.18543 0.242
ssr7035 Forward -394 -377 3.18543 0.242
ssr7036 Reverse -93 -110 6.52869 0.167
ssl7039 Forward -357 -340 6.43035 0.167
slr7041 Reverse -3 -20 6.43035 0.167
ssl7045 Forward -391 -374 1.71047 0.298
ssl7046 Forward -368 -351 2.10379 0.282
ssl7046 Forward -111 -94 1.71047 0.298
slr7081 Reverse -148 -165 4.07041 0.218
slr7096 Reverse -319 -336 3.67709 0.225
slr7099 Reverse -229 -246 5.15205 0.176
slr7104 Reverse -134 -151 8.88863 0.155
sll8001 Forward -130 -113 6.92201 0.166
sll8009 Reverse -265 -282 6.92201 0.166
slr8037 Reverse -353 -370 5.54538 0.176
ssr6002 Reverse -254 -271 12.4285 0.09
sll6052 Reverse -101 -118 2.30045 0.276
6803t03 Reverse -229 -246 4.26707 0.209
6803t04 Reverse -188 -205 7.61033 0.155
6803t07 Reverse -311 -328 5.9387 0.172
6803t09 Forward -177 -160 5.74204 0.176
6803t10 Reverse -18 -35 2.98877 0.249
6803t13 Reverse -161 -178 5.74204 0.176
6803t13 Forward -176 -159 3.57876 0.229
6803t16 Forward -96 -79 2.30045 0.276
6803t28 Forward -185 -168 2.59545 0.262
6803t35 Forward -200 -183 14.9851 0.0596
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.875  0.125  0.000  
0.000 0.000 0.000 1.000
0.000 0.125 0.000 0.875
0.000 0.000 1.000 0.000
0.000 0.250 0.375 0.375
0.000 1.000 0.000 0.000
0.000 0.000 0.750 0.250
1.000 0.000 0.000 0.000
0.000 0.000 0.000 1.000
0.000 1.000 0.000 0.000
0.000 0.000 0.750 0.250
0.250 0.125 0.500 0.125
0.375 0.375 0.250 0.000
0.000 0.125 0.000 0.875
0.125 0.375 0.125 0.375
0.500 0.000 0.500 0.000
0.000 0.375 0.625 0.000
0.000 0.000 0.000 1.000