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Details for NP_440071.1_6

Name NP_440071.1_6
Length 15
Regular expression [GT][CAG][CT]GGG[AG][GT][CT]AG[GC]G[CG][AT]
Central No

Motif logo

Genes containing this motif

137 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0611 Forward -156 -142 13.2231 0.297
slr1118 Reverse -59 -73 13.1262 0.299
slr0743a Forward -97 -83 14.1927 0.25
sll1323 Reverse -19 -33 14.4836 0.249
sll1675 Reverse -340 -354 14.0957 0.25
slr1800 Reverse -230 -244 13.9018 0.252
ssr1604 Forward -256 -242 13.417 0.278
slr1073 Forward -219 -205 13.9988 0.251
slr0679 Reverse -96 -110 16.2288 0.235
sll0639 Reverse -252 -266 14.1927 0.25
slr0692 Reverse -268 -282 14.0957 0.25
sll1513 Forward -300 -286 13.514 0.267
slr1601 Reverse -180 -194 14.0957 0.25
slr1045 Forward -93 -79 16.7136 0.217
sll1006 Reverse -36 -50 14.4836 0.249
slr1761 Forward -69 -55 17.0045 0.208
slr1763 Forward -287 -273 15.6471 0.235
slr2051 Reverse -211 -225 16.4227 0.235
sll1830 Forward -168 -154 13.9018 0.252
sll1289 Forward -286 -272 13.7079 0.261
sll1789 Reverse -19 -33 13.9988 0.251
slr1835 Reverse -154 -168 13.611 0.261
slr1841 Reverse -281 -295 14.5805 0.241
slr1543 Forward -161 -147 14.6775 0.241
sll1468 Forward -105 -91 13.8049 0.26
ssr2595 Reverse -234 -248 13.8049 0.26
slr1227 Forward -310 -296 14.9684 0.241
slr1364 Reverse -6 -20 14.9684 0.241
slr1366 Forward -282 -268 13.417 0.278
slr0879 Reverse -47 -61 14.1927 0.25
sll0873 Reverse -189 -203 14.8714 0.241
slr0881 Forward -252 -238 14.8714 0.241
sll0865 Reverse -158 -172 15.1623 0.241
slr1867 Reverse -42 -56 14.7744 0.241
slr1874 Forward -156 -142 14.6775 0.241
slr1888 Forward -184 -170 15.2592 0.241
sll1698 Forward -52 -38 18.071 0.108
sll1629 Forward -127 -113 14.7744 0.241
slr1735 Forward -223 -209 13.9988 0.251
sll0858 Forward -141 -127 14.8714 0.241
slr0867 Forward -222 -208 13.514 0.267
slr1246 Forward -233 -219 13.611 0.261
slr1257 Reverse -284 -298 14.5805 0.241
slr1991 Forward -313 -299 13.8049 0.26
slr1999 Forward -394 -380 13.417 0.278
slr1721 Reverse -221 -235 15.4531 0.235
slr1723 Reverse -173 -187 13.9018 0.252
slr1730 Reverse -94 -108 14.6775 0.241
ssl0467 Forward -340 -326 14.4836 0.249
slr2095 Reverse -197 -211 13.611 0.261
sll1425 Forward -209 -195 13.3201 0.293
slr1505 Reverse -2 -16 13.3201 0.293
slr1508 Reverse -159 -173 15.9379 0.235
sll1418 Reverse -143 -157 15.0653 0.241
sll1236 Reverse -16 -30 14.2897 0.25
slr1325 Forward -355 -341 14.2897 0.25
slr1959 Forward -284 -270 14.1927 0.25
sll1891 Reverse -177 -191 13.1262 0.299
sll1378 Reverse -307 -321 15.841 0.235
sll1182 Reverse -296 -310 18.7497 0.108
ssr2130 Reverse -278 -292 13.7079 0.261
sll1446 Reverse -12 -26 13.611 0.261
ssl3044 Forward -194 -180 13.9988 0.251
sll1555 Reverse -218 -232 15.5501 0.235
ssr2831 Forward -360 -346 15.5501 0.235
ssr2831 Forward -139 -125 13.7079 0.261
slr1689 Forward -398 -384 13.7079 0.261
sll1520 Reverse -314 -328 18.5558 0.108
slr0293 Reverse -331 -345 17.7801 0.123
sll0359 Forward -327 -313 13.2231 0.297
slr0397 Reverse -7 -21 13.2231 0.297
sll0356 Forward -221 -207 14.1927 0.25
slr0149 Forward -352 -338 16.8106 0.217
slr0151 Reverse -307 -321 14.0957 0.25
sll0142 Reverse -5 -19 13.2231 0.297
sll1848 Forward -316 -302 15.0653 0.241
sll0944 Reverse -377 -391 14.8714 0.241
sll0301 Forward -158 -144 13.611 0.261
slr0338 Forward -345 -331 13.2231 0.297
sll0163 Reverse -177 -191 13.9018 0.252
slr0361 Reverse -267 -281 14.6775 0.241
slr0369 Forward -85 -71 14.3866 0.249
slr0384 Forward -59 -45 14.9684 0.241
slr0387 Forward -47 -33 14.7744 0.241
sll0763 Reverse -353 -367 13.514 0.267
sll0762 Reverse -37 -51 13.514 0.267
sll0757 Reverse -208 -222 15.841 0.235
smr0001 Forward -63 -49 15.841 0.235
slr0780 Forward -312 -298 15.841 0.235
slr0341 Reverse -61 -75 14.0957 0.25
sll0017 Forward -243 -229 13.611 0.261
sll0016 Reverse -55 -69 14.8714 0.241
slr0006 Forward -344 -330 14.8714 0.241
slr0216 Reverse -300 -314 13.9988 0.251
slr0217 Reverse -138 -152 13.2231 0.297
slr0228 Forward -311 -297 13.514 0.267
ssl0788 Forward -212 -198 15.9379 0.235
slr0063 Forward -321 -307 13.1262 0.299
slr0066 Forward -115 -101 17.5862 0.125
slr0474 Forward -293 -279 13.1262 0.299
slr0476 Reverse -305 -319 13.611 0.261
slr0636 Forward -287 -273 14.5805 0.241
sll0397 Forward -15 -1 14.2897 0.25
sll0397 Forward -36 -22 13.8049 0.26
sll0383 Forward -18 -4 13.1262 0.299
sll0382 Forward -293 -279 14.3866 0.249
sll0371 Forward -346 -332 14.2897 0.25
slr0195 Forward -125 -111 15.1623 0.241
slr0208 Reverse -271 -285 13.9018 0.252
slr0897 Forward -104 -90 14.3866 0.249
slr0918 Forward -300 -286 13.417 0.278
sll0550 Reverse -298 -312 13.1262 0.299
slr0829 Reverse -225 -239 14.3866 0.249
sll0833 Forward -131 -117 14.8714 0.241
slr0509 Forward -334 -320 15.4531 0.235
sll0095 Reverse -74 -88 14.0957 0.25
slr0797 Forward -336 -322 15.6471 0.235
sll0737 Forward -52 -38 15.6471 0.235
slr0043 Reverse -147 -161 14.6775 0.241
sll0505 Reverse -24 -38 14.8714 0.241
slr0543 Reverse -323 -337 15.744 0.235
sll0499 Reverse -209 -223 13.1262 0.299
slr0544 Forward -219 -205 13.1262 0.299
slr0551 Reverse -247 -261 15.5501 0.235
sll1496 Forward -311 -297 13.7079 0.261
sll1485 Reverse -290 -304 14.7744 0.241
sll1481 Reverse -356 -370 13.7079 0.261
slr0758 Forward -166 -152 14.3866 0.249
slr1664 Reverse -275 -289 14.1927 0.25
sll1544 Reverse -142 -156 13.611 0.261
slr0588 Forward -365 -351 13.2231 0.297
slr0598 Forward -137 -123 18.071 0.108
sll5052 Forward -300 -286 13.611 0.261
sll5083 Forward -315 -301 15.4531 0.235
ssr5121 Forward -130 -116 14.5805 0.241
sll7064 Reverse -115 -129 13.9018 0.252
sll8001 Forward -328 -314 13.611 0.261
sll8027 Forward -23 -9 13.9988 0.251
slr8030 Forward -395 -381 15.9379 0.235
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.045  0.000  0.591  0.364  
0.227 0.455 0.227 0.091
0.182 0.364 0.136 0.318
0.136 0.000 0.864 0.000
0.091 0.000 0.727 0.182
0.045 0.045 0.818 0.091
0.545 0.000 0.409 0.045
0.136 0.000 0.545 0.318
0.000 0.500 0.136 0.364
0.864 0.000 0.000 0.136
0.182 0.000 0.682 0.136
0.000 0.227 0.773 0.000
0.000 0.000 0.909 0.091
0.045 0.591 0.364 0.000
0.545 0.045 0.091 0.318