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Details for NP_440056.1_9

Name NP_440056.1_9
Length 20
Regular expression T[CT][CT]T[GAC]GG[CA][AG][AG][AT]A[TC][CTG]CT[CG][GA][GAC][CGT]
Central Yes

Motif logo

Genes containing this motif

120 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll0558 Forward -71 -52 12.8967 0.295
sll0558 Forward -112 -93 12.7991 0.295
sll1056 Reverse -304 -323 13.287 0.295
slr0251 Reverse -262 -281 13.4822 0.295
sll1325 Forward -397 -378 18.069 0.152
sll1324 Reverse -276 -295 14.6533 0.272
slr1094 Forward -30 -11 15.1413 0.272
sll1036 Forward -341 -322 12.6039 0.295
slr1778 Reverse -355 -374 13.1894 0.295
slr1798 Reverse -216 -235 13.5798 0.295
sll1201 Forward -63 -44 12.8967 0.295
slr1291 Reverse -163 -182 12.8967 0.295
sll1191 Reverse -285 -304 12.7015 0.295
slr1301 Reverse -31 -50 17.2883 0.2
slr0965 Reverse -107 -126 15.4341 0.272
slr0969 Forward -391 -372 17.0931 0.2
sll0934 Reverse -212 -231 15.0437 0.272
sll0926 Reverse -160 -179 12.7015 0.295
sll0924 Reverse -248 -267 13.5798 0.295
slr1612 Forward -88 -69 14.263 0.272
slr1067 Reverse -139 -158 12.5063 0.295
sll0656 Reverse -189 -208 13.6774 0.295
sll0654 Reverse -271 -290 21.192 0.0309
slr0676 Forward -56 -37 21.192 0.0309
slr1601 Forward -82 -63 15.2389 0.272
sll1501 Forward -235 -216 13.0919 0.295
slr1045 Reverse -183 -202 21.8751 0.0309
slr1909 Forward -83 -64 15.2389 0.272
sll1297 Forward -132 -113 12.7015 0.295
slr1140 Reverse -40 -59 13.3846 0.295
sll1071 Reverse -362 -381 18.3618 0.143
ssr2009 Reverse -150 -169 12.7015 0.295
sll1967 Forward -308 -289 14.0678 0.272
slr2072 Reverse -55 -74 14.0678 0.272
sll1737 Forward -106 -87 12.8967 0.295
slr1828 Reverse -144 -163 12.8967 0.295
sll1723 Forward -75 -56 16.8979 0.212
slr1224 Forward -259 -240 15.8244 0.259
slr1444 Reverse -106 -125 12.7991 0.295
sll1354 Reverse -42 -61 14.5557 0.272
slr0891 Forward -199 -180 19.1425 0.141
slr1860 Reverse -308 -327 14.7509 0.272
slr1822 Forward -60 -41 13.0919 0.295
slr1740 Reverse -330 -349 12.5063 0.295
slr1742 Forward -391 -372 13.3846 0.295
slr0851 Reverse -86 -105 14.4581 0.272
sll1949 Reverse -219 -238 14.0678 0.272
slr2067 Forward -128 -109 14.0678 0.272
ssr2898 Forward -364 -345 12.7991 0.295
sll0253 Reverse -39 -58 13.9702 0.277
slr0260 Forward -27 -8 13.9702 0.277
slr0264 Reverse -319 -338 13.0919 0.295
slr1512 Reverse -63 -82 16.5076 0.241
sll1994 Reverse -172 -191 12.5063 0.295
slr2130 Forward -239 -220 12.5063 0.295
ssr2194 Reverse -301 -320 13.287 0.295
sll1236 Reverse -102 -121 16.0196 0.259
slr1325 Forward -269 -250 16.0196 0.259
slr0817 Reverse -377 -396 13.4822 0.295
sll0804 Forward -57 -38 14.263 0.272
sll1244 Forward -369 -350 13.3846 0.295
ssl3573 Forward -301 -282 14.0678 0.272
sll1892 Reverse -371 -390 17.9714 0.152
sll1869 Forward -113 -94 13.1894 0.295
slr1984 Reverse -37 -56 13.1894 0.295
slr1471 Reverse -138 -157 12.6039 0.295
slr1266 Reverse -325 -344 12.6039 0.295
slr1278 Reverse -128 -147 15.0437 0.272
sll1172 Forward -189 -170 14.263 0.272
slr1279 Reverse -94 -113 14.263 0.272
sll1561 Reverse -9 -28 13.1894 0.295
slr1681 Forward -341 -322 13.1894 0.295
slr1691 Reverse -144 -163 14.5557 0.272
slr0958 Forward -96 -77 12.4087 0.298
slr1641 Reverse -363 -382 12.4087 0.298
sll1521 Reverse -333 -352 14.8485 0.272
sll0419 Reverse -331 -350 12.9943 0.295
sll0268 Reverse -233 -252 18.557 0.141
sll0264 Reverse -236 -255 12.6039 0.295
sll0263 Reverse -138 -157 15.7268 0.263
sll1865 Forward -201 -182 13.0919 0.295
slr0993 Reverse -333 -352 16.2148 0.259
slr0770 Forward -373 -354 13.3846 0.295
slr0772 Reverse -37 -56 14.5557 0.272
sll0066 Reverse -266 -285 15.8244 0.259
slr0479 Reverse -334 -353 17.1907 0.2
slr0492 Reverse -207 -226 16.1172 0.259
slr0639 Reverse -6 -25 12.5063 0.295
sll0609 Reverse -381 -400 12.7991 0.295
sll0608 Reverse -112 -131 12.7991 0.295
slr0642 Forward -291 -272 12.7991 0.295
sll0602 Forward -70 -51 13.8726 0.282
slr0645 Reverse -61 -80 13.8726 0.282
sll0370 Forward -375 -356 14.0678 0.272
slr0920 Forward -144 -125 14.7509 0.272
sll0891 Forward -365 -346 14.4581 0.272
ssl1690 Forward -109 -90 14.4581 0.272
slr0921 Reverse -274 -293 14.4581 0.272
sll0593 Reverse -289 -308 16.8003 0.212
sll0109 Reverse -250 -269 15.8244 0.259
slr0314 Reverse -344 -363 12.4087 0.298
sll0043 Reverse -330 -349 15.5316 0.272
sll0506 Reverse -256 -275 12.5063 0.295
slr0557 Reverse -151 -170 13.4822 0.295
slr1419 Reverse -272 -291 13.287 0.295
slr1455 Forward -340 -321 13.0919 0.295
slr0453 Reverse -85 -104 12.8967 0.295
slr1189 Forward -286 -267 14.6533 0.272
slr0606 Reverse -73 -92 12.6039 0.295
sll5033 Reverse -125 -144 18.6546 0.141
sll5042 Forward -264 -245 14.4581 0.272
slr5082 Forward -76 -57 14.8485 0.272
slr5119 Forward -76 -57 14.8485 0.272
sll7002 Reverse -152 -171 18.9474 0.141
slr7010 Forward -210 -191 14.7509 0.272
ssl7074 Reverse -112 -131 14.1654 0.272
slr8022 Reverse -193 -212 12.4087 0.298
slr6044 Forward -157 -138 12.6039 0.295
6803t01 Reverse -50 -69 15.1413 0.272
6803t03 Reverse -47 -66 13.5798 0.295
6803t17 Reverse -240 -259 13.4822 0.295
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.050  0.150  0.800  
0.050 0.500 0.000 0.450
0.000 0.450 0.150 0.400
0.000 0.000 0.000 1.000
0.250 0.250 0.450 0.050
0.000 0.050 0.950 0.000
0.000 0.100 0.900 0.000
0.300 0.450 0.150 0.100
0.650 0.050 0.300 0.000
0.650 0.000 0.350 0.000
0.500 0.150 0.050 0.300
0.650 0.050 0.150 0.150
0.000 0.250 0.050 0.700
0.000 0.400 0.200 0.400
0.000 0.900 0.000 0.100
0.050 0.000 0.050 0.900
0.000 0.500 0.350 0.150
0.450 0.000 0.550 0.000
0.350 0.200 0.450 0.000
0.050 0.550 0.200 0.200