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Details for NP_440042.1_2

Name NP_440042.1_2
Length 20
Regular expression [CT]C[AT]G[TCG][TA][CAT]TG[GC]C[CG][CA][GA]A[TA]CGC[GC]
Central No

Motif logo

Genes containing this motif

206 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0611 Forward -328 -309 0.786102 0.213
slr1489 Forward -199 -180 -2.0655 0.257
sll1052 Forward -221 -202 -2.26216 0.258
slr1129 Forward -222 -203 0.982764 0.213
sll0703 Reverse -349 -368 0.58944 0.213
slr0742 Forward -385 -366 -3.3438 0.282
slr0241 Reverse -327 -346 0.58944 0.213
sll0223 Reverse -118 -137 2.55606 0.195
sll0223 Reverse -37 -56 -0.787193 0.233
sll0222 Forward -129 -110 28.3188 0.0017
sll1319 Reverse -373 -392 -3.14714 0.276
slr1099 Reverse -190 -209 0.294447 0.213
slr1102 Reverse -227 -246 -5.21209 0.296
sll1680 Forward -103 -84 2.16274 0.195
ssr3000 Forward -291 -272 -3.04881 0.274
sll1191 Forward -321 -302 -0.000545616 0.22
slr0963 Reverse -361 -380 -5.50708 0.296
slr0971 Reverse -207 -226 7.17762 0.184
sll0932 Reverse -271 -290 -2.65548 0.261
ssr1766 Reverse -146 -165 -4.91709 0.295
slr1079 Forward -238 -219 -0.295539 0.227
slr1085 Forward -263 -244 1.0811 0.213
slr0670 Forward -316 -297 -4.72043 0.293
slr0677 Forward -99 -80 -0.885524 0.233
sll0641 Reverse -358 -377 -4.13045 0.293
slr1590 Forward -157 -138 -5.40875 0.296
sll1509 Reverse -241 -260 -5.31042 0.296
slr1599 Forward -125 -106 -5.31042 0.296
ssr2711 Reverse -174 -193 -5.01543 0.296
sll1011 Reverse -257 -276 -4.91709 0.295
slr1050 Forward -67 -48 -4.91709 0.295
slr1053 Forward -150 -131 8.45592 0.184
slr1055 Forward -101 -82 -0.0988766 0.221
sll1636 Forward -137 -118 -1.08219 0.233
slr1770 Reverse -156 -175 -1.08219 0.233
ssr3122 Reverse -376 -395 1.76941 0.201
ssr3451 Forward -392 -373 4.42435 0.191
ssr3452 Reverse -228 -247 0.294447 0.213
slr2038 Forward -103 -84 2.0644 0.197
slr1024 Forward -310 -291 -0.688862 0.231
slr1034 Reverse -98 -117 3.53937 0.191
ssl2559 Reverse -212 -231 4.12936 0.191
slr1396 Reverse -331 -350 -0.983855 0.233
slr2027 Forward -91 -72 2.85105 0.195
slr1135 Reverse -82 -101 -5.40875 0.296
slr1148 Reverse -348 -367 -4.6221 0.293
sll1069 Forward -127 -108 -1.96717 0.254
sml0006 Reverse -199 -218 8.94757 0.184
slr1900 Forward -352 -333 0.294447 0.213
slr1197 Forward -329 -310 -1.18052 0.237
sll1739 Forward -349 -330 -5.31042 0.296
slr1830 Reverse -327 -346 0.58944 0.213
sll1726 Reverse -131 -150 -1.27885 0.237
sll1725 Reverse -147 -166 -4.22878 0.293
sll1721 Forward -109 -90 2.3594 0.195
slr1838 Reverse -269 -288 2.3594 0.195
sll1456 Forward -361 -342 3.53937 0.191
sll1632 Forward -388 -369 -0.885524 0.233
slr1230 Forward -223 -204 -5.21209 0.296
slr1443 Forward -220 -201 -0.787193 0.233
slr1364 Forward -266 -247 -0.197208 0.226
sll1270 Reverse -98 -117 -1.67217 0.251
slr0879 Reverse -201 -220 0.392778 0.213
slr1407 Reverse -310 -329 0.196116 0.213
slr1859 Reverse -169 -188 7.96426 0.184
sll1761 Forward -131 -112 -0.590531 0.231
ssl3829 Reverse -262 -281 1.86774 0.199
slr2141 Forward -176 -157 1.86774 0.199
ssl3291 Reverse -328 -347 1.37609 0.213
sll1702 Reverse -53 -72 -4.32711 0.293
slr1811 Forward -239 -220 -2.45882 0.261
sll1624 Forward -278 -259 -4.72043 0.293
slr1744 Reverse -233 -252 -1.08219 0.233
sll0837 Reverse -339 -358 0.58944 0.213
sll1156 Reverse -247 -266 -0.688862 0.231
sll1150 Reverse -338 -357 8.75091 0.184
slr1260 Forward -182 -163 1.57275 0.202
sll1961 Reverse -109 -128 2.45773 0.195
slr1994 Reverse -107 -126 -5.21209 0.296
slr1999 Forward -225 -206 -2.65548 0.261
slr1719 Forward -332 -313 11.2092 0.144
ssl3127 Forward -361 -342 18.584 0.0289
slr0272 Forward -314 -295 2.16274 0.195
slr2082 Forward -203 -184 -0.688862 0.231
slr2082 Reverse -326 -345 -4.42544 0.293
sll1981 Forward -172 -153 -0.590531 0.231
sll1423 Forward -292 -273 -2.45882 0.261
slr1506 Reverse -143 -162 -2.45882 0.261
sll1231 Reverse -230 -249 -0.885524 0.233
slr0813 Reverse -227 -246 5.70265 0.191
sll0808 Reverse -248 -267 0.58944 0.213
slr0821 Forward -173 -154 0.58944 0.213
slr0823 Forward -377 -358 4.22769 0.191
sll1250 Reverse -158 -177 7.27595 0.184
slr1349 Reverse -328 -347 -2.65548 0.261
sll1242 Reverse -89 -108 -2.26216 0.258
slr1956 Forward -44 -25 -2.26216 0.258
sll1886 Reverse -103 -122 2.45773 0.195
slr1983 Forward -378 -359 -0.0988766 0.221
sll1380 Forward -147 -128 -5.31042 0.296
slr1476 Reverse -62 -81 -5.31042 0.296
slr1278 Reverse -309 -328 10.4225 0.153
sll1085 Forward -218 -199 -3.04881 0.274
slr1691 Reverse -73 -92 0.0977854 0.215
slr0937 Forward -194 -175 1.67108 0.201
slr0940 Forward -272 -253 2.26107 0.195
slr0941 Reverse -60 -79 -3.44213 0.282
slr0948 Reverse -144 -163 -0.983855 0.233
sll1537 Forward -300 -281 1.27776 0.213
sll1537 Forward -235 -216 0.982764 0.213
slr1627 Reverse -178 -197 1.27776 0.213
slr1627 Reverse -243 -262 0.982764 0.213
slr1639 Forward -355 -336 4.32602 0.191
slr1646 Forward -243 -224 7.17762 0.184
sll0421 Reverse -165 -184 4.42435 0.191
sll0268 Reverse -156 -175 -5.40875 0.296
sll0263 Forward -108 -89 -2.26216 0.258
slr0284 Reverse -320 -339 -3.04881 0.274
ssl0483 Reverse -308 -327 -4.72043 0.293
slr0292 Forward -31 -12 -4.72043 0.293
sll0257 Forward -240 -221 0.392778 0.213
slr0398 Forward -111 -92 0.392778 0.213
slr0400 Reverse -297 -316 6.58763 0.189
slr0359 Reverse -220 -239 2.3594 0.195
sml0001 Reverse -332 -351 1.86774 0.199
slr0374 Forward -262 -243 -5.60541 0.299
sll0329 Reverse -327 -346 -1.7705 0.251
slr0387 Forward -378 -359 12.2908 0.118
slr0770 Forward -360 -341 -3.73712 0.289
ssl1417 Reverse -310 -329 -0.4922 0.229
sll0310 Reverse -209 -228 2.75272 0.195
sll0309 Reverse -229 -248 0.884433 0.213
sll0022 Forward -340 -321 -4.42544 0.293
sll0019 Forward -303 -284 -4.91709 0.295
sll0006 Reverse -44 -63 -4.42544 0.293
ssl0787 Reverse -341 -360 0.884433 0.213
ssr0102 Forward -237 -218 -5.50708 0.296
sll0069 Forward -166 -147 1.0811 0.213
slr0055 Reverse -183 -202 0.196116 0.213
sll0053 Forward -92 -73 -1.86883 0.253
slr0069 Reverse -26 -45 -1.86883 0.253
sll0462 Reverse -29 -48 0.687771 0.213
sll0613 Forward -271 -252 0.982764 0.213
sll0609 Reverse -122 -141 -4.32711 0.293
sll0396 Forward -247 -228 3.73603 0.191
sll0379 Reverse -229 -248 0.0977854 0.215
sll0376 Reverse -278 -297 1.67108 0.201
sll0373 Reverse -208 -227 -5.60541 0.299
sll0189 Forward -203 -184 -4.32711 0.293
ssl0353 Forward -187 -168 -2.45882 0.261
slr0909 Forward -237 -218 -4.03212 0.293
sll0552 Reverse -14 -33 -0.295539 0.227
sll0542 Reverse -295 -314 0.982764 0.213
sll0827 Forward -117 -98 -4.32711 0.293
slr0841 Reverse -150 -169 -4.32711 0.293
slr0846 Forward -249 -230 6.58763 0.189
sll0487 Reverse -174 -193 -1.47551 0.244
sll0479 Reverse -271 -290 -3.44213 0.282
slr0619 Reverse -300 -319 -0.688862 0.231
sll0107 Forward -236 -217 -4.52377 0.293
slr0313 Reverse -259 -278 2.85105 0.195
slr0313 Forward -367 -348 -2.16383 0.258
slr0319 Reverse -175 -194 -1.7705 0.251
sll0781 Reverse -135 -154 -1.37718 0.24
slr0699 Forward -86 -67 -4.22878 0.293
sll0661 Reverse -191 -210 3.73603 0.191
slr0023 Forward -329 -310 -5.50708 0.296
sll0040 Forward -261 -242 -2.36049 0.261
slr0033 Reverse -145 -164 7.57094 0.184
slr0044 Reverse -116 -135 6.19431 0.189
sll0506 Forward -25 -6 -4.6221 0.293
sll0902 Forward -288 -269 -4.22878 0.293
sll0899 Forward -57 -38 -2.55715 0.261
ssr1562 Reverse -186 -205 -2.55715 0.261
ssl1004 Reverse -258 -277 9.14423 0.184
slr1424 Reverse -86 -105 0.884433 0.213
sll1336 Forward -327 -308 -1.96717 0.254
slr1451 Forward -145 -126 3.83436 0.191
slr1454 Reverse -61 -80 -0.4922 0.229
slr1455 Reverse -242 -261 -0.885524 0.233
slr1459 Reverse -204 -223 -1.27885 0.237
ssr1114 Reverse -320 -339 10.7175 0.153
slr1568 Reverse -235 -254 -2.65548 0.261
sll1483 Forward -176 -157 -5.01543 0.296
slr0586 Forward -55 -36 1.57275 0.202
sll0576 Reverse -121 -140 21.6323 0.00906
slr0597 Reverse -184 -203 3.34271 0.194
slr0605 Reverse -159 -178 0.58944 0.213
slr0605 Reverse -297 -316 -0.983855 0.233
slr0610 Reverse -30 -49 2.26107 0.195
sll5002 Forward -330 -311 -0.983855 0.233
slr5054 Forward -154 -135 9.93088 0.163
sll5063 Forward -80 -61 -4.72043 0.293
ssl5099 Reverse -181 -200 -4.6221 0.293
slr5101 Forward -394 -375 -4.6221 0.293
sll5109 Forward -372 -353 -0.4922 0.229
slr7014 Reverse -251 -270 2.3594 0.195
slr7016 Forward -116 -97 -2.26216 0.258
ssl7020 Forward -72 -53 -4.32711 0.293
sll7029 Reverse -97 -116 -0.590531 0.231
ssl7074 Reverse -107 -126 3.6377 0.191
sll7085 Reverse -291 -310 -1.7705 0.251
sll8033 Forward -390 -371 -5.31042 0.296
slr8038 Reverse -213 -232 2.55606 0.195
sll8048 Reverse -90 -109 -3.73712 0.289
slr6011 Forward -270 -251 -1.27885 0.237
ssr6032 Reverse -163 -182 0.196116 0.213
slr6033 Reverse -182 -201 0.196116 0.213
slr6070 Forward -270 -251 -1.27885 0.237
slr6091 Reverse -182 -201 0.196116 0.213
6803t01 Forward -127 -108 -2.85214 0.271
6803t03 Forward -251 -232 -0.39387 0.229
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.750  0.000  0.250  
0.000 1.000 0.000 0.000
0.750 0.000 0.000 0.250
0.000 0.000 1.000 0.000
0.000 0.250 0.250 0.500
0.250 0.000 0.000 0.750
0.250 0.500 0.000 0.250
0.000 0.000 0.000 1.000
0.000 0.000 1.000 0.000
0.000 0.250 0.750 0.000
0.000 1.000 0.000 0.000
0.000 0.500 0.500 0.000
0.250 0.750 0.000 0.000
0.250 0.000 0.750 0.000
1.000 0.000 0.000 0.000
0.250 0.000 0.000 0.750
0.000 1.000 0.000 0.000
0.000 0.000 1.000 0.000
0.000 1.000 0.000 0.000
0.000 0.250 0.750 0.000