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Details for NP_440031.1_10

Name NP_440031.1_10
Length 20
Regular expression CC[CG]CA[AG]GG[ACG][CG]TG[GA]TG[AG]TGGG
Central No

Motif logo

Genes containing this motif

205 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1317 Forward -249 -230 18.289 0.0942
sll1392 Reverse -84 -103 4.12936 0.256
slr1114 Reverse -97 -116 -0.688862 0.288
sll1043 Reverse -180 -199 5.40766 0.256
slr0744 Reverse -258 -277 14.0608 0.0942
slr0250 Forward -126 -107 4.52268 0.256
slr1417 Forward -373 -354 -0.39387 0.282
slr1100 Forward -298 -279 2.75272 0.257
slr1107 Forward -185 -166 9.63589 0.173
slr1107 Reverse -172 -191 0.196116 0.28
sll1676 Reverse -168 -187 1.27776 0.274
sll1671 Reverse -220 -239 4.916 0.256
slr1790 Forward -122 -103 4.916 0.256
slr1795 Reverse -275 -294 11.8975 0.151
sll1664 Forward -165 -146 2.55606 0.26
sll1664 Reverse -112 -131 -0.295539 0.282
slr1800 Reverse -211 -230 0.0977854 0.282
slr1300 Forward -249 -230 0.687771 0.274
sll1192 Forward -113 -94 0.491109 0.276
sll1185 Forward -392 -373 2.45773 0.26
slr0966 Forward -131 -112 -0.000545616 0.282
sll0932 Reverse -134 -153 0.786102 0.274
sll0928 Forward -132 -113 -0.787193 0.29
slr1073 Forward -371 -352 6.19431 0.237
slr1085 Reverse -377 -396 1.76941 0.269
sll0634 Reverse -333 -352 1.96607 0.264
sll1516 Forward -279 -260 0.982764 0.274
slr1596 Reverse -110 -129 0.982764 0.274
sll1513 Forward -307 -288 0.491109 0.276
sll1512 Reverse -291 -310 10.8159 0.167
sll1510 Forward -159 -140 2.75272 0.257
slr1609 Forward -202 -183 -0.39387 0.282
slr1042 Reverse -265 -284 3.73603 0.256
sll1643 Reverse -302 -321 -0.787193 0.29
sll1638 Forward -127 -108 6.19431 0.237
slr1768 Reverse -235 -254 6.19431 0.237
sll1934 Forward -398 -379 14.4541 0.0942
slr1907 Reverse -141 -160 6.4893 0.237
sll1837 Reverse -280 -299 -0.0988766 0.282
sll1834 Reverse -239 -258 3.93269 0.256
slr1915 Forward -261 -242 3.93269 0.256
sll1833 Reverse -257 -276 3.14605 0.256
sll1297 Forward -114 -95 4.12936 0.256
slr1398 Reverse -32 -51 4.916 0.256
slr1398 Reverse -325 -344 2.65439 0.26
slr1398 Forward -399 -380 0.392778 0.276
slr1708 Reverse -178 -197 2.55606 0.26
slr2008 Reverse -349 -368 4.12936 0.256
ssr3409 Forward -35 -16 2.85105 0.257
ssr3410 Forward -325 -306 2.85105 0.257
sll1920 Reverse -222 -241 13.1758 0.109
sll1916 Forward -356 -337 -0.197208 0.282
sll1910 Forward -175 -156 0.58944 0.276
sll1077 Reverse -53 -72 -0.197208 0.282
slr1142 Forward -384 -365 -0.197208 0.282
slr1150 Forward -356 -337 6.98095 0.237
sll1820 Reverse -165 -184 -0.197208 0.282
sll1791 Reverse -187 -206 9.93088 0.167
ssl2233 Reverse -330 -349 5.80098 0.256
sll1121 Reverse -111 -130 -0.000545616 0.282
sll1971 Reverse -300 -319 2.26107 0.26
sll1721 Reverse -381 -400 1.0811 0.274
slr1751 Forward -393 -374 3.83436 0.256
slr1236 Forward -264 -245 6.98095 0.237
sll1130 Reverse -117 -136 -0.885524 0.295
sll1127 Reverse -135 -154 0.392778 0.276
slr1239 Forward -66 -47 0.392778 0.276
slr1440 Forward -394 -375 14.4541 0.0942
sll1348 Forward -30 -11 3.44104 0.256
sll0873 Forward -370 -351 4.03102 0.256
slr0881 Reverse -71 -90 4.03102 0.256
slr1859 Forward -106 -87 2.26107 0.26
sll1775 Reverse -4 -23 2.0644 0.264
sll1774 Forward -373 -354 1.47442 0.27
sll1771 Forward -372 -353 0.0977854 0.282
sml0007 Forward -79 -60 -0.295539 0.282
slr2141 Reverse -1 -20 -0.295539 0.282
sll1626 Forward -341 -322 0.982764 0.274
sll0854 Forward -205 -186 4.42435 0.256
sll0837 Reverse -91 -110 3.04771 0.256
slr0868 Reverse -333 -352 1.96607 0.264
slr1253 Forward -359 -340 0.786102 0.274
sll1958 Reverse -283 -302 0.196116 0.28
slr2059 Reverse -139 -158 3.93269 0.256
sll1956 Reverse -72 -91 0.392778 0.276
slr1991 Forward -255 -236 -0.688862 0.288
sll1586 Forward -41 -22 5.01433 0.256
slr0265 Forward -224 -205 4.52268 0.256
ssl0461 Forward -288 -269 -0.787193 0.29
slr2084 Forward -20 -1 0.196116 0.28
slr2101 Forward -296 -277 -0.4922 0.285
ssr2554 Reverse -149 -168 5.70265 0.256
ssr2554 Forward -169 -150 0.687771 0.274
slr1521 Reverse -73 -92 1.27776 0.274
slr2131 Forward -293 -274 10.5209 0.167
ssr2227 Forward -377 -358 -0.787193 0.29
sll0817 Reverse -254 -273 0.196116 0.28
slr0816 Forward -261 -242 0.0977854 0.282
slr0818 Reverse -354 -373 9.24257 0.185
slr1348 Forward -270 -251 2.94938 0.257
slr1353 Reverse -287 -306 0.294447 0.28
slr1971 Forward -157 -138 -0.39387 0.282
sll1868 Reverse -20 -39 2.94938 0.257
sll1867 Reverse -207 -226 3.6377 0.256
sll1388 Reverse -358 -377 0.786102 0.274
smr0010 Forward -82 -63 0.786102 0.274
sll1386 Reverse -282 -301 -0.4922 0.285
sll1370 Forward -320 -301 6.98095 0.237
ssr2130 Reverse -212 -231 13.9625 0.0942
sll1446 Forward -115 -96 0.982764 0.274
sll1439 Reverse -352 -371 -0.000545616 0.282
slr1531 Forward -108 -89 -0.000545616 0.282
slr1169 Forward -42 -23 3.04771 0.256
sll1085 Forward -298 -279 1.27776 0.274
slr1676 Reverse -374 -393 0.491109 0.276
slr1679 Reverse -277 -296 -0.0988766 0.282
sll1558 Forward -134 -115 1.67108 0.269
sll0921 Reverse -318 -337 1.67108 0.269
sll0266 Forward -206 -187 5.30933 0.256
slr0148 Reverse -263 -282 2.0644 0.264
sll0149 Forward -162 -143 3.14605 0.256
sll0149 Forward -181 -162 -0.295539 0.282
slr1934 Forward -224 -205 1.57275 0.27
sll1854 Reverse -305 -324 1.96607 0.264
slr1942 Reverse -196 -215 -0.4922 0.285
slr1950 Reverse -356 -375 1.27776 0.274
sll0173 Reverse -98 -117 2.45773 0.26
sll0162 Forward -393 -374 3.83436 0.256
slr0370 Reverse -136 -155 3.6377 0.256
slr0377 Forward -74 -55 3.14605 0.256
slr0773 Reverse -68 -87 1.47442 0.27
sll0763 Forward -49 -30 0.491109 0.276
sll0752 Forward -256 -237 5.60432 0.256
slr0782 Reverse -376 -395 5.60432 0.256
slr0341 Reverse -376 -395 7.07928 0.237
sll0325 Forward -63 -44 3.44104 0.256
sll0325 Reverse -49 -68 1.47442 0.27
slr0342 Reverse -160 -179 3.44104 0.256
slr0342 Forward -174 -155 1.47442 0.27
sll0321 Forward -155 -136 1.76941 0.269
slr0216 Forward -195 -176 6.78429 0.237
sll0207 Reverse -251 -270 3.04771 0.256
sll0068 Reverse -197 -216 1.17943 0.274
sll0065 Reverse -329 -348 2.26107 0.26
slr0053 Forward -46 -27 2.26107 0.26
sll0063 Reverse -246 -265 2.3594 0.26
slr0058 Forward -298 -279 2.3594 0.26
sll0459 Forward -232 -213 0.491109 0.276
sll0687 Forward -298 -279 -0.590531 0.288
slr0636 Forward -288 -269 4.42435 0.256
sll0606 Forward -205 -186 -0.590531 0.288
slr0417 Forward -198 -179 -0.39387 0.282
sll0384 Forward -374 -355 3.73603 0.256
sll0380 Reverse -118 -137 0.687771 0.274
slr0420 Reverse -243 -262 0.687771 0.274
slr0427 Forward -382 -363 8.25926 0.202
slr0196 Reverse -124 -143 3.04771 0.256
slr0210 Reverse -359 -378 2.45773 0.26
slr0895 Forward -269 -250 8.35759 0.202
sll0891 Reverse -5 -24 0.884433 0.274
slr0923 Forward -395 -376 -0.688862 0.288
slr0924 Forward -200 -181 3.53937 0.256
sll0550 Reverse -7 -26 -0.590531 0.288
sll0549 Forward -51 -32 8.06259 0.202
slr0569 Reverse -245 -264 8.06259 0.202
slr0073 Reverse -203 -222 4.52268 0.256
sll0479 Reverse -117 -136 5.211 0.256
slr0518 Forward -129 -110 0.982764 0.274
sll0096 Reverse -99 -118 3.44104 0.256
slr0306 Reverse -298 -317 0.294447 0.28
sll0282 Reverse -287 -306 15.5357 0.0942
slr0797 Forward -174 -155 1.47442 0.27
slr0707 Forward -137 -118 7.96426 0.202
sll0661 Forward -275 -256 1.17943 0.274
smr0003 Reverse -147 -166 1.67108 0.269
slr0713 Reverse -346 -365 1.67108 0.269
sll0043 Forward -264 -245 -0.885524 0.295
sll0517 Forward -125 -106 -0.0988766 0.282
slr0525 Reverse -177 -196 -0.0988766 0.282
slr0536 Reverse -67 -86 2.75272 0.257
slr0925 Forward -286 -267 9.93088 0.167
slr1419 Reverse -302 -321 5.40766 0.256
ssl2667 Forward -63 -44 -0.688862 0.288
sll1363 Reverse -172 -191 1.96607 0.264
slr0652 Forward -305 -286 1.96607 0.264
sll0630 Reverse -313 -332 -0.197208 0.282
slr1571 Forward -223 -204 10.6192 0.167
slr1579 Forward -52 -33 -0.39387 0.282
sll0732 Reverse -219 -238 6.29264 0.237
slr0753 Forward -331 -312 6.29264 0.237
ssr2781 Reverse -264 -283 3.24438 0.256
slr0453 Forward -385 -366 -0.295539 0.282
sll0431 Reverse -163 -182 3.34271 0.256
slr0462 Forward -190 -171 3.34271 0.256
slr1188 Reverse -278 -297 5.11266 0.256
sll1106 Reverse -366 -385 6.29264 0.237
sll0564 Reverse -224 -243 0.884433 0.274
slr0599 Forward -163 -144 0.884433 0.274
slr0610 Reverse -64 -83 1.76941 0.269
ssl5068 Reverse -95 -114 8.94757 0.193
sll5097 Reverse -188 -207 1.37609 0.274
sll5097 Forward -202 -183 -0.295539 0.282
ssl5108 Reverse -74 -93 10.0292 0.167
sll7006 Forward -163 -144 8.16093 0.202
slr7025 Forward -314 -295 0.687771 0.274
sll7033 Forward -205 -186 11.6025 0.151
ssl7053 Forward -273 -254 1.0811 0.274
ssl8024 Reverse -332 -351 17.109 0.0942
sll8033 Reverse -379 -398 -0.688862 0.288
slr6007 Reverse -221 -240 3.83436 0.256
slr6043 Reverse -319 -338 14.3558 0.0942
slr6066 Reverse -221 -240 3.83436 0.256
slr6090 Forward -132 -113 0.58944 0.276
6803t19 Reverse -49 -68 0.786102 0.274
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  1.000  0.000  0.000  
0.000 1.000 0.000 0.000
0.000 0.636 0.273 0.091
0.000 0.818 0.000 0.182
1.000 0.000 0.000 0.000
0.545 0.182 0.273 0.000
0.091 0.000 0.909 0.000
0.000 0.091 0.909 0.000
0.364 0.273 0.273 0.091
0.000 0.636 0.273 0.091
0.000 0.000 0.000 1.000
0.000 0.000 1.000 0.000
0.273 0.000 0.727 0.000
0.000 0.091 0.182 0.727
0.000 0.091 0.909 0.000
0.727 0.000 0.273 0.000
0.000 0.000 0.000 1.000
0.091 0.000 0.909 0.000
0.182 0.000 0.818 0.000
0.091 0.000 0.909 0.000