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Details for NP_440028.1_6

Name NP_440028.1_6
Length 19
Regular expression [TCG][CG]AA[TC]TG[CA]GG[CA][GT]G[ACT][TA][AG][TA]GG
Central No

Motif logo

Genes containing this motif

240 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1317 Forward -219 -201 12.8022 0.24
ssl2733 Forward -382 -364 13.0972 0.24
slr1120 Forward -69 -51 12.9988 0.24
slr1122 Forward -181 -163 10.9339 0.276
slr0721 Forward -239 -221 14.9655 0.218
sll0712 Reverse -134 -152 11.2289 0.265
sll0712 Reverse -122 -140 9.95058 0.294
slr0723 Forward -368 -350 12.4089 0.24
sll0702 Reverse -323 -341 12.5072 0.24
sml0003 Forward -129 -111 15.4571 0.218
slr0245 Reverse -20 -38 15.4571 0.218
slr0251 Reverse -79 -97 10.0489 0.292
sll1325 Forward -192 -174 10.4422 0.279
slr1417 Reverse -78 -96 10.6389 0.277
sll1319 Reverse -292 -310 10.2456 0.282
slr1098 Reverse -112 -130 9.85225 0.294
slr1100 Forward -129 -111 17.1287 0.193
sll1035 Reverse -156 -174 12.4089 0.24
slr1106 Forward -79 -61 12.4089 0.24
sll1031 Forward -262 -244 14.4738 0.218
slr1776 Forward -388 -370 13.9821 0.218
slr1780 Reverse -254 -272 11.0322 0.274
slr1293 Reverse -238 -256 14.0805 0.218
ssr2142 Forward -244 -226 10.4422 0.279
slr0962 Forward -240 -222 10.5406 0.277
slr0971 Forward -399 -381 13.6872 0.225
slr0984 Forward -177 -159 16.0471 0.218
sll1020 Reverse -336 -354 11.7205 0.254
sll0649 Forward -316 -298 15.1621 0.218
sll0649 Forward -322 -304 10.5406 0.277
sll0649 Forward -211 -193 10.1472 0.289
sll0641 Reverse -238 -256 12.9005 0.24
slr1600 Forward -181 -163 12.5072 0.24
smr0005 Forward -134 -116 12.2122 0.245
slr1601 Forward -369 -351 12.2122 0.245
slr1056 Reverse -319 -337 13.8838 0.218
slr1056 Forward -202 -184 10.6389 0.277
sll1749a Forward -300 -282 12.5072 0.24
slr1851 Reverse -294 -312 12.5072 0.24
sll1945 Reverse -141 -159 10.7372 0.277
slr2033 Forward -95 -77 10.7372 0.277
sll1941 Reverse -118 -136 10.0489 0.292
slr2042 Forward -342 -324 10.0489 0.292
sll1937 Reverse -221 -239 14.2771 0.218
slr1907 Reverse -363 -381 13.1955 0.24
slr1912 Reverse -283 -301 11.9172 0.253
slr1913 Forward -320 -302 11.6222 0.259
sll0983 Reverse -258 -276 10.5406 0.277
sll0981 Reverse -225 -243 13.1955 0.24
sll1296 Forward -263 -245 9.85225 0.294
slr1395 Reverse -299 -317 13.9821 0.218
slr2031 Forward -276 -258 9.95058 0.294
slr1134 Forward -292 -274 19.292 0.121
slr1134 Forward -319 -301 12.5072 0.24
slr1135 Forward -367 -349 10.6389 0.277
sll1082 Forward -242 -224 10.8356 0.277
sll1079 Forward -252 -234 14.2771 0.218
sll1815 Forward -200 -182 10.4422 0.279
sll1812 Forward -189 -171 16.6371 0.218
sll1805 Reverse -80 -98 12.9005 0.24
sll1804 Reverse -40 -58 9.95058 0.294
ssl3432 Forward -172 -154 12.8022 0.24
sll1802 Forward -307 -289 10.2456 0.282
sll1801 Forward -384 -366 10.3439 0.282
sll1791 Forward -239 -221 12.4089 0.24
slr1199 Forward -190 -172 10.9339 0.276
slr1214 Reverse -110 -128 11.0322 0.274
slr1215 Forward -209 -191 13.0972 0.24
slr1215 Forward -308 -290 12.6055 0.24
sll1969 Reverse -91 -109 15.2604 0.218
sll1744 Forward -269 -251 12.8022 0.24
sll1737 Reverse -331 -349 14.6705 0.218
slr1829 Forward -351 -333 14.6705 0.218
sll1736 Forward -72 -54 14.1788 0.218
sll1735 Reverse -265 -283 12.4089 0.24
slr1842 Forward -350 -332 11.2289 0.265
sll1469 Reverse -158 -176 10.7372 0.277
slr1542 Forward -249 -231 10.0489 0.292
slr1218 Forward -368 -350 10.4422 0.279
slr1235 Reverse -82 -100 12.1139 0.253
slr1443 Reverse -237 -255 9.85225 0.294
ssr2422 Forward -133 -115 10.5406 0.277
sll0869 Forward -282 -264 14.2771 0.218
sll0869 Forward -135 -117 14.0805 0.218
ssr1499 Forward -173 -155 13.7855 0.218
sll0862 Forward -287 -269 11.5239 0.259
sll0860 Forward -236 -218 12.6055 0.24
sll1314 Reverse -107 -125 12.6055 0.24
slr1403 Forward -277 -259 12.6055 0.24
sll1784 Forward -209 -191 10.7372 0.277
slr1854 Forward -261 -243 18.112 0.134
sll1773 Forward -288 -270 12.9005 0.24
slr1876 Reverse -292 -310 10.4422 0.279
sll1765 Forward -304 -286 18.5054 0.121
sll1764 Forward -188 -170 14.0805 0.218
slr1885 Reverse -192 -210 11.7205 0.254
sll1708 Reverse -359 -377 10.3439 0.282
sll1697 Reverse -262 -280 18.5054 0.121
slr1820 Forward -397 -379 11.2289 0.265
slr0851 Reverse -195 -213 11.5239 0.259
sll1163 Reverse -16 -34 11.0322 0.274
sll1158 Forward -143 -125 9.85225 0.294
slr1256 Reverse -346 -364 13.7855 0.218
sll1961 Forward -47 -29 11.8189 0.253
slr2004 Reverse -283 -301 11.4255 0.261
sll1606 Forward -256 -238 18.6037 0.121
slr1729 Reverse -334 -352 11.9172 0.253
slr0263 Forward -83 -65 10.3439 0.282
sll0250 Forward -186 -168 18.407 0.121
sll0245 Reverse -11 -29 11.9172 0.253
slr2098 Forward -392 -374 11.9172 0.253
slr1507 Forward -74 -56 10.6389 0.277
ssr2551 Forward -391 -373 12.8022 0.24
slr2123 Reverse -204 -222 11.0322 0.274
sll1995 Forward -341 -323 12.7038 0.24
sll1995 Reverse -60 -78 10.9339 0.276
sll1231 Forward -264 -246 11.7205 0.254
slr1331 Reverse -16 -34 11.5239 0.259
sll1218 Reverse -119 -137 14.2771 0.218
sll0819 Reverse -196 -214 9.85225 0.294
sll0818 Forward -152 -134 11.4255 0.261
sll0818 Forward -230 -212 10.3439 0.282
slr0812 Reverse -254 -272 12.9005 0.24
sll0809 Forward -182 -164 10.6389 0.277
slr0817 Reverse -96 -114 10.6389 0.277
sll0802 Forward -134 -116 11.8189 0.253
slr1340 Reverse -54 -72 14.8671 0.218
sll1254 Reverse -270 -288 9.95058 0.294
sll1250 Forward -119 -101 10.7372 0.277
sll1245 Forward -399 -381 11.2289 0.265
slr1957 Forward -354 -336 10.2456 0.282
sll1884 Forward -336 -318 14.7688 0.218
slr1266 Reverse -196 -214 14.1788 0.218
slr1273 Forward -206 -188 12.5072 0.24
slr1288 Forward -375 -357 15.1621 0.218
sll1433 Reverse -186 -204 14.2771 0.218
slr1174 Reverse -75 -93 11.8189 0.253
slr1677 Forward -237 -219 15.8504 0.218
slr1677 Reverse -160 -178 12.2122 0.245
slr1687 Reverse -260 -278 23.7169 0.00797
sll1557 Forward -332 -314 11.8189 0.253
slr0936 Reverse -237 -255 12.5072 0.24
slr0954 Forward -28 -10 11.4255 0.261
slr0957 Forward -97 -79 10.5406 0.277
slr1623 Forward -202 -184 15.0638 0.218
ssl2971 Forward -228 -210 9.85225 0.294
slr1647 Reverse -131 -149 12.6055 0.24
slr1647 Forward -122 -104 11.8189 0.253
sll1521 Forward -283 -265 10.5406 0.277
sll0421 Reverse -69 -87 18.702 0.121
slr0445 Forward -41 -23 18.702 0.121
slr0445 Reverse -290 -308 16.8337 0.214
slr0445 Reverse -344 -362 12.3105 0.245
sll0269 Reverse -15 -33 12.9988 0.24
sll0257 Forward -388 -370 9.95058 0.294
sll0364 Reverse -30 -48 14.6705 0.218
slr0394 Forward -21 -3 14.6705 0.218
slr0147 Forward -222 -204 15.7521 0.218
slr0148 Forward -232 -214 14.2771 0.218
sll0146 Forward -123 -105 11.8189 0.253
sll0145 Forward -265 -247 11.2289 0.265
sll1863 Reverse -347 -365 11.7205 0.254
slr1935 Forward -207 -189 11.0322 0.274
sll1849 Reverse -335 -353 11.4255 0.261
slr1945 Reverse -148 -166 10.2456 0.282
sll0301 Forward -165 -147 10.8356 0.277
sll0293 Reverse -211 -229 9.85225 0.294
sll0162 Reverse -325 -343 10.4422 0.279
slr0184 Forward -326 -308 10.1472 0.289
slr0366 Reverse -256 -274 17.3254 0.185
sll0335 Reverse -125 -143 11.0322 0.274
slr0373 Forward -155 -137 11.0322 0.274
sll0772 Reverse -153 -171 14.0805 0.218
sll0755 Reverse -222 -240 15.0638 0.218
sll0754 Forward -22 -4 10.7372 0.277
ssl1417 Forward -308 -290 10.8356 0.277
ssl1417 Forward -236 -218 9.85225 0.294
slr0350 Forward -324 -306 11.4255 0.261
slr0356 Forward -287 -269 9.95058 0.294
slr0018 Forward -263 -245 13.9821 0.218
slr0020 Forward -225 -207 10.2456 0.282
sll0210 Reverse -208 -226 10.0489 0.292
sll0204 Forward -285 -267 15.0638 0.218
sll0195 Forward -188 -170 12.5072 0.24
sll0412 Forward -308 -290 11.5239 0.259
slr0436 Forward -328 -310 11.3272 0.265
slr0436 Forward -129 -111 11.2289 0.265
sll0401 Reverse -377 -395 13.7855 0.218
slr0440 Forward -374 -356 13.7855 0.218
sll0068 Forward -307 -289 9.95058 0.294
sll0067 Reverse -318 -336 12.0155 0.253
sll0690 Reverse -309 -327 12.2122 0.245
ssl1300 Reverse -49 -67 12.2122 0.245
sll0614 Reverse -80 -98 15.6538 0.218
slr0416 Forward -149 -131 10.7372 0.277
slr0195 Forward -130 -112 12.5072 0.24
slr0196 Reverse -300 -318 14.8671 0.218
ssl0331 Reverse -261 -279 11.9172 0.253
ssl0331 Reverse -369 -387 10.8356 0.277
slr0924 Forward -259 -241 10.9339 0.276
sll0547 Reverse -3 -21 15.4571 0.218
slr0581 Reverse -326 -344 11.2289 0.265
sll0540 Forward -202 -184 11.5239 0.259
sll0485 Reverse -311 -329 13.9821 0.218
slr0502 Reverse -337 -355 11.7205 0.254
slr0520 Forward -215 -197 10.1472 0.289
sll0470 Reverse -16 -34 13.5888 0.232
slr0104 Forward -205 -187 11.8189 0.253
slr0111 Forward -219 -201 9.85225 0.294
slr0120 Reverse -295 -313 11.2289 0.265
slr0790 Forward -238 -220 9.95058 0.294
slr0793 Reverse -137 -155 11.5239 0.259
sll0776 Forward -277 -259 16.0471 0.218
slr0707 Forward -112 -94 11.8189 0.253
slr0710 Forward -233 -215 13.8838 0.218
slr0711 Reverse -360 -378 17.7187 0.157
slr0023 Reverse -355 -373 10.7372 0.277
sll0498 Forward -146 -128 14.0805 0.218
sll1342 Reverse -264 -282 12.2122 0.245
slr1455 Forward -104 -86 10.2456 0.282
slr0656 Forward -354 -336 13.4905 0.233
sll0623 Forward -200 -182 10.5406 0.277
slr1563 Reverse -322 -340 14.2771 0.218
sll1470 Reverse -37 -55 11.5239 0.259
slr1588 Forward -192 -174 11.5239 0.259
sll1552 Forward -109 -91 11.8189 0.253
slr1651 Reverse -125 -143 10.3439 0.282
slr1653 Forward -147 -129 12.0155 0.253
ssr2781 Forward -177 -159 12.6055 0.24
sll1544 Reverse -135 -153 10.8356 0.277
slr0597 Reverse -30 -48 10.0489 0.292
slr0601 Reverse -214 -232 11.1305 0.274
ssl5025 Forward -199 -181 12.7038 0.24
sll5036 Reverse -349 -367 10.2456 0.282
slr5038 Forward -192 -174 10.2456 0.282
sll5043 Reverse -175 -193 12.9005 0.24
sll5060 Forward -306 -288 10.9339 0.276
ssl5065 Forward -118 -100 13.9821 0.218
slr5073 Reverse -352 -370 19.587 0.121
ssl5100 Reverse -110 -128 12.4089 0.24
slr5101 Forward -111 -93 12.4089 0.24
sll7030 Forward -211 -193 13.1955 0.24
ssl7039 Reverse -202 -220 14.2771 0.218
slr7041 Forward -158 -140 14.2771 0.218
sll7056 Forward -241 -223 10.5406 0.277
slr7057 Reverse -245 -263 10.5406 0.277
sll8035 Forward -167 -149 13.2938 0.24
slr6009 Forward -202 -184 13.4905 0.233
ssr6048 Forward -81 -63 14.6705 0.218
slr6049 Forward -295 -277 14.6705 0.218
sll6053 Forward -20 -2 10.4422 0.279
slr6068 Forward -202 -184 13.4905 0.233
slr6096 Forward -208 -190 16.1454 0.218
slr6097 Forward -46 -28 10.6389 0.277
6803t07 Forward -88 -70 10.2456 0.282
6803t18 Reverse -279 -297 11.2289 0.265
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.333  0.222  0.444  
0.167 0.500 0.222 0.111
0.667 0.167 0.000 0.167
0.778 0.000 0.111 0.111
0.111 0.389 0.000 0.500
0.000 0.000 0.056 0.944
0.000 0.000 0.889 0.111
0.222 0.556 0.056 0.167
0.000 0.111 0.889 0.000
0.111 0.000 0.889 0.000
0.389 0.500 0.056 0.056
0.000 0.000 0.722 0.278
0.000 0.000 1.000 0.000
0.333 0.333 0.111 0.222
0.222 0.056 0.167 0.556
0.556 0.056 0.333 0.056
0.278 0.167 0.000 0.556
0.000 0.000 1.000 0.000
0.000 0.056 0.944 0.000