Your browser is old and dusty. Try Google Chrome!

Details for NP_439984.1_10

Name NP_439984.1_10
Length 15
Regular expression T[TC]C[ACT][CG]CAC[CT][AG]GA[AG]CC
Central Yes

Motif logo

Genes containing this motif

65 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1315 Reverse -350 -364 11.1104 0.253
sll1060 Reverse -87 -101 11.1104 0.253
ssr1853 Forward -369 -355 11.1104 0.253
sll1056 Reverse -146 -160 11.602 0.246
sll0712 Forward -399 -385 21.2384 0.0994
slr1094 Reverse -382 -396 11.7003 0.246
slr0679 Reverse -216 -230 13.6669 0.186
slr1593 Forward -40 -26 10.0287 0.296
sll1513 Forward -154 -140 10.9137 0.253
slr1052 Forward -349 -335 11.602 0.246
ssr1698 Reverse -79 -93 12.0937 0.246
sll0995 Forward -195 -181 12.3887 0.232
slr1035 Forward -114 -100 14.6503 0.162
sll1298 Forward -346 -332 11.1104 0.253
slr1383 Reverse -321 -335 11.1104 0.253
slr1392 Reverse -201 -215 12.192 0.24
slr2009 Forward -259 -245 11.1104 0.253
slr2016 Reverse -301 -315 14.6503 0.162
slr1550 Reverse -78 -92 17.9935 0.162
slr1862 Forward -41 -27 10.9137 0.253
sll1766 Reverse -179 -193 12.192 0.24
sll0855 Forward -119 -105 21.2384 0.0994
sll0855 Reverse -230 -244 10.8154 0.254
sll0846 Forward -61 -47 13.5686 0.186
slr0862 Reverse -129 -143 13.5686 0.186
slr1998 Forward -139 -125 11.2087 0.253
slr1719 Reverse -358 -372 14.0603 0.186
sll1586 Reverse -19 -33 10.8154 0.254
ssr2549 Reverse -177 -191 10.9137 0.253
slr1979 Reverse -94 -108 10.6187 0.255
slr1471 Forward -75 -61 11.5037 0.253
slr1629 Reverse -98 -112 12.3887 0.232
sll1534 Reverse -38 -52 23.1067 0.0649
slr1645 Reverse -199 -213 13.077 0.205
slr0443 Reverse -386 -400 11.897 0.246
sll0269 Forward -75 -61 15.0436 0.162
slr0162 Reverse -345 -359 12.487 0.232
sll0298 Reverse -188 -202 13.9619 0.186
ssl0564 Forward -392 -378 13.077 0.205
ssl1417 Reverse -241 -255 11.012 0.253
slr0341 Reverse -247 -261 16.1252 0.162
sll0319 Reverse -55 -69 13.372 0.186
slr0348 Forward -222 -208 13.372 0.186
slr0001 Forward -372 -358 11.9953 0.246
sll0462 Forward -81 -67 10.0287 0.296
slr0638 Reverse -371 -385 12.3887 0.232
sll0369 Reverse -243 -257 10.6187 0.255
sll0189 Forward -255 -241 13.2736 0.186
slr0897 Reverse -330 -344 14.9452 0.162
slr0924 Reverse -138 -152 11.7987 0.246
sll0478 Reverse -238 -252 12.6836 0.228
slr0514 Reverse -312 -326 12.2903 0.232
sll0664 Forward -381 -367 11.7987 0.246
slr0710 Reverse -306 -320 11.7987 0.246
slr0531 Reverse -196 -210 11.307 0.253
sll1496 Reverse -262 -276 13.372 0.186
sll1482 Reverse -331 -345 10.8154 0.254
slr1664 Forward -337 -323 12.8803 0.221
slr1187 Reverse -277 -291 13.372 0.186
sll0573 Reverse -381 -395 18.6818 0.162
slr0593 Forward -138 -124 13.6669 0.186
slr7025 Forward -137 -123 11.5037 0.253
slr6031 Forward -160 -146 10.6187 0.255
slr6090 Forward -160 -146 10.6187 0.255
slr6096 Forward -146 -132 13.372 0.186
6803t39 Forward -294 -280 12.6836 0.228
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.000  1.000  
0.000 0.333 0.000 0.667
0.000 1.000 0.000 0.000
0.333 0.333 0.000 0.333
0.000 0.500 0.500 0.000
0.000 1.000 0.000 0.000
1.000 0.000 0.000 0.000
0.000 1.000 0.000 0.000
0.167 0.500 0.000 0.333
0.667 0.000 0.333 0.000
0.000 0.167 0.833 0.000
1.000 0.000 0.000 0.000
0.667 0.000 0.333 0.000
0.000 0.833 0.000 0.167
0.000 1.000 0.000 0.000