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Details for NP_439976.1_4

Name NP_439976.1_4
Length 20
Regular expression [TC][CA]C[CT][GAC][CT]C[AG][ACGTC][TG][TAG]C[TC][ACG][CG]C[GACTA]ATT
Central Yes

Motif logo

Genes containing this motif

110 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr1127 Forward -307 -288 23.008 0.0517
sll0703 Forward -248 -229 5.50519 0.278
sll1321 Reverse -279 -298 9.04509 0.278
sll1683 Reverse -24 -43 9.93006 0.278
slr1291 Forward -393 -374 7.27514 0.278
sll1196 Forward -304 -285 5.50519 0.278
sll1189 Reverse -237 -256 6.78348 0.278
slr0974 Forward -390 -371 4.71854 0.278
slr0985 Reverse -343 -362 5.40686 0.278
slr1082 Forward -270 -251 5.60352 0.278
slr0676 Forward -381 -362 6.09517 0.278
sll0646 Reverse -111 -130 6.09517 0.278
ssl2920 Reverse -223 -242 5.2102 0.278
slr1609 Reverse -155 -174 4.52188 0.286
slr1048 Reverse -63 -82 4.32522 0.289
sll1752 Forward -85 -66 6.58682 0.278
ssr3122 Reverse -185 -204 6.58682 0.278
slr2033 Forward -394 -375 5.80018 0.278
sll1294 Reverse -354 -373 8.25844 0.278
sll1575 Forward -304 -285 5.99684 0.278
slr1710 Reverse -176 -195 7.66846 0.278
sll1069 Forward -27 -8 6.29183 0.278
sll1633 Forward -243 -224 5.40686 0.278
slr0880 Reverse -79 -98 5.70185 0.278
sll0871 Reverse -181 -200 5.99684 0.278
slr0884 Forward -135 -116 5.99684 0.278
slr1866 Forward -98 -79 8.94676 0.278
slr1869 Forward -347 -328 7.27514 0.278
sll1688 Forward -150 -131 5.11187 0.278
slr1820 Reverse -225 -244 5.11187 0.278
slr0854 Reverse -304 -323 6.29183 0.278
sll0846 Forward -60 -41 4.62021 0.28
slr0862 Reverse -130 -149 4.62021 0.28
sll0842 Forward -163 -144 6.58682 0.278
slr2000 Forward -210 -191 12.3883 0.278
slr1722 Forward -319 -300 5.50519 0.278
slr1723 Forward -31 -12 21.1397 0.0517
slr2103 Reverse -116 -135 5.11187 0.278
slr1347 Forward -316 -297 5.11187 0.278
sll1900 Reverse -64 -83 5.11187 0.278
sll1891 Reverse -381 -400 5.99684 0.278
sll1885 Forward -357 -338 5.70185 0.278
sll1377 Reverse -35 -54 7.86512 0.278
slr1478 Forward -134 -115 7.86512 0.278
sll1178 Reverse -225 -244 19.6648 0.0529
sll1444 Forward -196 -177 4.42355 0.287
sll1095 Reverse -29 -48 6.39016 0.278
slr1159 Forward -83 -64 6.39016 0.278
ssl3044 Reverse -216 -235 4.81688 0.278
slr1689 Reverse -41 -60 9.24175 0.278
slr1626 Reverse -8 -27 4.62021 0.28
sll1524 Forward -185 -166 11.2084 0.278
slr1644 Reverse -140 -159 11.2084 0.278
ssr3304 Forward -345 -326 12.7816 0.278
ssr3307 Reverse -226 -245 10.2251 0.278
sll1841 Reverse -204 -223 5.11187 0.278
slr0990 Reverse -113 -132 6.1935 0.278
sll0335 Forward -157 -138 4.81688 0.278
slr0373 Reverse -123 -142 4.81688 0.278
sll0772 Reverse -257 -276 6.68515 0.278
sll0759 Forward -121 -102 5.80018 0.278
sll0752 Reverse -233 -252 5.01354 0.278
slr0782 Forward -399 -380 5.01354 0.278
sll0314 Forward -127 -108 5.50519 0.278
slr0354 Reverse -25 -44 5.50519 0.278
sll0005 Forward -381 -362 18.1898 0.0646
sll0191 Reverse -207 -226 10.9134 0.278
sll0191 Reverse -216 -235 7.96345 0.278
ssr0102 Reverse -71 -90 4.71854 0.278
slr0050 Reverse -361 -380 4.71854 0.278
sll0459 Reverse -47 -66 5.30853 0.278
slr0476 Forward -145 -126 5.30853 0.278
slr0479 Reverse -306 -325 5.40686 0.278
sll0394 Forward -254 -235 6.09517 0.278
slr0418 Reverse -15 -34 9.93006 0.278
sll0371 Reverse -309 -328 7.96345 0.278
sll0556 Reverse -290 -309 6.09517 0.278
sll0830 Forward -248 -229 8.55343 0.278
slr0839 Forward -325 -306 10.6184 0.278
slr0079 Forward -249 -230 15.5349 0.171
slr0082 Reverse -206 -225 5.80018 0.278
slr0092 Reverse -253 -272 4.42355 0.287
sll0588 Reverse -153 -172 5.11187 0.278
sll0108 Reverse -39 -58 6.1935 0.278
sll0100 Reverse -353 -372 5.80018 0.278
sll0282 Reverse -124 -143 4.32522 0.289
slr0795 Reverse -130 -149 6.58682 0.278
slr0711 Forward -380 -361 5.11187 0.278
sll0740 Forward -142 -123 4.91521 0.278
sll0043 Reverse -176 -195 5.01354 0.278
sll0036 Forward -218 -199 5.01354 0.278
slr0530 Reverse -222 -241 4.71854 0.278
slr0536 Reverse -55 -74 4.91521 0.278
slr0930 Forward -319 -300 9.83173 0.278
sll0529 Reverse -301 -320 9.24175 0.278
sll1342 Forward -333 -314 4.81688 0.278
slr1454 Forward -246 -227 7.4718 0.278
slr1456 Forward -232 -213 9.63507 0.278
sll1484 Forward -121 -102 12.88 0.278
sll0729 Reverse -17 -36 6.29183 0.278
slr1653 Reverse -283 -302 4.42355 0.287
ssr2781 Forward -306 -287 9.24175 0.278
ssr2786 Forward -88 -69 6.09517 0.278
slr0455 Forward -312 -293 6.88182 0.278
ssl7039 Reverse -294 -313 7.4718 0.278
slr7041 Forward -66 -47 7.4718 0.278
slr7097 Reverse -374 -393 4.32522 0.289
slr6006 Reverse -68 -87 4.81688 0.278
slr6065 Reverse -68 -87 4.81688 0.278
6803t29 Reverse -327 -346 6.39016 0.278
6803t40 Reverse -327 -346 6.39016 0.278
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

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