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Details for NP_439975.1_3

Name NP_439975.1_3
Length 14
Regular expression [GT][GA][GT][GT][GA]A[GA][TGA][GA][GA][GT]G[GT]A
Central Yes

Motif logo

Genes containing this motif

47 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll0923 Reverse -282 -295 16.9322 0.201
ssr1765 Forward -178 -165 16.1456 0.231
slr1083 Reverse -365 -378 16.4406 0.205
sll0649 Forward -396 -383 16.2439 0.228
slr1770 Forward -384 -371 15.8506 0.26
ssl2542 Forward -81 -68 15.4572 0.274
slr2007 Reverse -145 -158 16.8339 0.201
sll1924 Forward -285 -272 18.8005 0.154
slr2015 Reverse -166 -179 18.8005 0.154
slr1236 Forward -258 -245 16.7355 0.201
sll0869 Forward -273 -260 16.8339 0.201
ssl0467 Forward -275 -262 16.7355 0.201
sll1980 Forward -200 -187 16.6372 0.201
sll1979 Forward -139 -126 16.9322 0.201
slr2094 Reverse -98 -111 16.9322 0.201
slr0818 Reverse -333 -346 15.5556 0.274
slr1974 Forward -322 -309 16.7355 0.201
slr1288 Reverse -18 -31 15.4572 0.274
slr1670 Reverse -35 -48 16.7355 0.201
slr1004 Reverse -212 -225 17.7189 0.201
slr0935 Forward -72 -59 17.7189 0.201
slr1626 Reverse -123 -136 17.7189 0.201
sll0268 Forward -165 -152 16.1456 0.231
sll0258 Reverse -30 -43 15.6539 0.274
slr0990 Forward -358 -345 17.8172 0.201
sll0007 Forward -150 -137 16.1456 0.231
sll0412 Forward -113 -100 16.2439 0.228
sll0613 Forward -163 -150 16.9322 0.201
slr0633 Reverse -39 -52 16.9322 0.201
sll0381 Reverse -121 -134 16.5389 0.201
ssr0692 Forward -354 -341 16.5389 0.201
ssr0330 Forward -363 -350 19.6855 0.134
sll0596 Forward -284 -271 16.6372 0.201
ssl0546 Reverse -87 -100 16.7355 0.201
sll0493 Forward -346 -333 15.4572 0.274
slr1420 Forward -311 -298 15.6539 0.274
sll1333 Forward -387 -374 15.3589 0.285
sll0727 Reverse -74 -87 16.5389 0.201
sll1547 Reverse -164 -177 17.1289 0.201
slr1189 Reverse -20 -33 15.4572 0.274
sll0564 Reverse -234 -247 20.7671 0.0474
slr0599 Forward -153 -140 20.7671 0.0474
slr0600 Reverse -226 -239 18.9972 0.154
slr5093 Forward -119 -106 16.6372 0.201
ssr5121 Forward -237 -224 17.4239 0.201
sll7069 Forward -123 -110 15.4572 0.274
slr7071 Reverse -380 -393 15.4572 0.274
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.700  0.300  
0.400 0.100 0.500 0.000
0.000 0.000 0.700 0.300
0.100 0.000 0.600 0.300
0.200 0.000 0.800 0.000
0.800 0.000 0.100 0.100
0.200 0.000 0.800 0.000
0.200 0.000 0.300 0.500
0.200 0.000 0.800 0.000
0.200 0.000 0.800 0.000
0.000 0.000 0.700 0.300
0.000 0.000 1.000 0.000
0.000 0.000 0.600 0.400
1.000 0.000 0.000 0.000