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Details for NP_439950.1_1

Name NP_439950.1_1
Length 10
Regular expression GGG[AG]GA[AT]TTA
Central No

Motif logo

Genes containing this motif

311 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
slr0613 Reverse -5 -14 12.2911 0.287
sll0558 Reverse -251 -260 12.2911 0.287
slr1315 Forward -284 -275 14.4544 0.224
sll1205 Forward -253 -244 12.2911 0.287
sll1204 Reverse -150 -159 14.8477 0.189
slr1114 Forward -363 -354 13.1761 0.277
slr1115 Forward -209 -200 14.7494 0.195
sll1051 Forward -193 -184 14.4544 0.224
slr0727 Forward -272 -263 13.1761 0.277
sll0696 Reverse -373 -382 13.4711 0.277
slr0242 Reverse -163 -172 15.0444 0.156
sll0220 Reverse -179 -188 16.0277 0.145
slr1105 Reverse -169 -178 16.126 0.145
slr1107 Forward -246 -237 17.306 0.145
sll1030 Reverse -48 -57 12.2911 0.287
slr1777 Reverse -372 -381 14.7494 0.195
sll1671 Forward -366 -357 14.8477 0.189
sll1656 Reverse -77 -86 15.1427 0.156
sll1200 Reverse -24 -33 16.0277 0.145
slr1293 Forward -194 -185 16.0277 0.145
slr1302 Forward -187 -178 13.2744 0.277
sll0931 Forward -221 -212 13.7661 0.24
slr1614 Reverse -295 -304 13.4711 0.277
ssr1766 Forward -36 -27 13.2744 0.277
slr1078 Forward -342 -333 13.2744 0.277
slr1087 Reverse -329 -338 12.4878 0.279
ssl1972 Forward -322 -313 13.2744 0.277
sll1021 Forward -244 -235 13.1761 0.277
ssr1789 Reverse -11 -20 14.5527 0.212
sll0647 Forward -261 -252 16.0277 0.145
sll0646 Forward -116 -107 16.0277 0.145
sll0645 Forward -348 -339 17.4043 0.145
slr0689 Forward -56 -47 14.5527 0.212
sll0638 Reverse -384 -393 13.1761 0.277
slr1591 Reverse -83 -92 16.0277 0.145
slr1595 Forward -191 -182 14.5527 0.212
sll1512 Reverse -329 -338 13.5694 0.266
slr1041 Reverse -304 -313 16.0277 0.145
slr1045 Reverse -66 -75 14.7494 0.195
slr1047 Forward -170 -161 16.0277 0.145
slr1053 Forward -29 -20 12.2911 0.287
slr1053 Reverse -12 -21 12.2911 0.287
sll1009 Reverse -131 -140 13.2744 0.277
slr1055 Forward -357 -348 13.2744 0.277
sll1001 Forward -182 -173 13.1761 0.277
slr1753 Reverse -366 -375 13.1761 0.277
sll1636 Reverse -41 -50 16.0277 0.145
slr1770 Forward -252 -243 16.0277 0.145
slr1849 Forward -147 -138 15.0444 0.156
ssr3452 Forward -307 -298 12.4878 0.279
sll1937 Reverse -9 -18 14.4544 0.224
slr2043 Forward -98 -89 14.4544 0.224
slr2045 Forward -389 -380 16.126 0.145
slr1910 Reverse -286 -295 12.2911 0.287
slr1911 Reverse -81 -90 12.4878 0.279
slr1918 Forward -303 -294 13.1761 0.277
sll1830 Forward -137 -128 16.0277 0.145
sll1830 Reverse -356 -365 13.1761 0.277
slr1919 Reverse -10 -19 16.0277 0.145
sll0995 Forward -15 -6 12.5861 0.279
slr1390 Reverse -288 -297 12.2911 0.287
ssl2542 Reverse -172 -181 12.2911 0.287
slr1702 Reverse -10 -19 15.1427 0.156
sll1571 Forward -111 -102 13.2744 0.277
sll1927 Forward -283 -274 13.2744 0.277
slr2005 Reverse -324 -333 13.2744 0.277
sll1925 Forward -26 -17 14.5527 0.212
slr2006 Reverse -377 -386 16.0277 0.145
slr2006 Reverse -189 -198 14.5527 0.212
slr2012 Reverse -118 -127 13.1761 0.277
slr2013 Forward -89 -80 15.0444 0.156
slr2019 Forward -120 -111 14.7494 0.195
sll1084 Reverse -80 -89 12.1928 0.296
slr1136 Forward -233 -224 12.1928 0.296
sll1077 Reverse -209 -218 12.2911 0.287
slr1142 Forward -228 -219 12.2911 0.287
ssl3446 Reverse -220 -229 13.1761 0.277
sll1791 Forward -118 -109 12.4878 0.279
slr1201 Reverse -249 -258 12.4878 0.279
slr1208 Forward -130 -121 15.0444 0.156
sll1744 Forward -362 -353 12.2911 0.287
sll1736 Reverse -189 -198 12.2911 0.287
slr1835 Reverse -171 -180 15.1427 0.156
slr1536 Forward -229 -220 15.1427 0.156
slr1537 Forward -74 -65 16.0277 0.145
slr1546 Reverse -144 -153 13.5694 0.266
sll1466 Forward -349 -340 14.7494 0.195
ssl2823 Forward -115 -106 14.7494 0.195
sll1464 Reverse -145 -154 16.126 0.145
sll1461 Forward -144 -135 12.4878 0.279
slr1236 Reverse -262 -271 16.126 0.145
sll1131 Reverse -297 -306 13.1761 0.277
sll1131 Forward -240 -231 12.4878 0.279
slr1437 Forward -203 -194 12.2911 0.287
sll1354 Forward -194 -185 13.2744 0.277
sll1348 Forward -249 -240 12.4878 0.279
sll1276 Reverse -106 -115 13.4711 0.277
sll1275 Reverse -268 -277 13.2744 0.277
sll1274 Reverse -180 -189 13.2744 0.277
slr1365 Forward -146 -137 17.4043 0.145
slr1366 Reverse -129 -138 15.0444 0.156
slr1368 Forward -200 -191 13.2744 0.277
sll0877 Reverse -345 -354 17.306 0.145
slr0876 Reverse -342 -351 12.1928 0.296
sll0873 Reverse -81 -90 16.126 0.145
slr0881 Forward -360 -351 16.126 0.145
sll0862 Forward -228 -219 13.5694 0.266
sll0860 Forward -153 -144 12.4878 0.279
sll1316 Forward -390 -381 13.1761 0.277
smr0009 Reverse -179 -188 13.1761 0.277
slr1863 Reverse -386 -395 17.4043 0.145
sll2011 Forward -289 -280 12.5861 0.279
sll1687 Reverse -76 -85 17.306 0.145
slr1821 Forward -58 -49 17.306 0.145
sll1629 Reverse -165 -174 13.1761 0.277
slr1735 Forward -322 -313 16.0277 0.145
slr1747 Reverse -2 -11 14.5527 0.212
sll0854 Forward -241 -232 12.1928 0.296
slr0861 Forward -232 -223 14.5527 0.212
sll0837 Reverse -275 -284 14.7494 0.195
slr0869 Reverse -172 -181 14.5527 0.212
slr0872 Forward -25 -16 15.0444 0.156
sll1160 Reverse -356 -365 14.8477 0.189
slr1248 Forward -59 -50 16.126 0.145
slr2058 Reverse -295 -304 15.0444 0.156
sll1950 Forward -284 -275 12.1928 0.296
sll1909 Forward -47 -38 14.4544 0.224
slr2002 Forward -197 -188 13.8644 0.237
sll1902 Reverse -44 -53 14.8477 0.189
ssr3402 Forward -310 -301 14.8477 0.189
slr1726 Reverse -19 -28 12.4878 0.279
sll1592 Forward -164 -155 16.0277 0.145
slr1731 Reverse -343 -352 12.5861 0.279
sll0254 Forward -253 -244 12.2911 0.287
sll0240 Reverse -167 -176 12.5861 0.279
slr2088 Forward -384 -375 12.2911 0.287
sll1982 Reverse -197 -206 16.126 0.145
slr2092 Forward -66 -57 16.126 0.145
sll1979 Forward -131 -122 14.4544 0.224
slr2094 Reverse -106 -115 14.4544 0.224
slr2100 Reverse -263 -272 14.5527 0.212
sll1998 Forward -240 -231 17.4043 0.145
sll1998 Forward -117 -108 12.4878 0.279
slr2124 Forward -243 -234 15.1427 0.156
slr2125 Reverse -242 -251 13.1761 0.277
sll1994a Reverse -141 -150 15.1427 0.156
sll1994a Forward -299 -290 14.7494 0.195
sll1237 Forward -164 -155 12.5861 0.279
slr0815 Forward -297 -288 13.2744 0.277
slr1342 Forward -233 -224 12.1928 0.296
sll1253 Forward -230 -221 16.126 0.145
sll1249 Forward -376 -367 12.4878 0.279
sll1242 Reverse -15 -24 13.2744 0.277
slr1956 Forward -118 -109 13.2744 0.277
sll1888 Forward -70 -61 14.8477 0.189
smr0011 Forward -146 -137 14.4544 0.224
slr1469 Forward -293 -284 14.4544 0.224
slr1470 Forward -44 -35 14.8477 0.189
slr1471 Forward -242 -233 13.4711 0.277
sll1372 Forward -301 -292 14.4544 0.224
sll1371 Forward -302 -293 16.0277 0.145
slr1530 Reverse -101 -110 13.7661 0.24
sll1433 Forward -311 -302 13.2744 0.277
sll1433 Reverse -248 -257 13.2744 0.277
sll1103 Forward -135 -126 15.1427 0.156
slr1168 Forward -188 -179 14.4544 0.224
slr1169 Reverse -365 -374 14.5527 0.212
ssr1951 Forward -289 -280 13.1761 0.277
sll1566 Forward -102 -93 14.7494 0.195
slr1678 Forward -92 -83 16.0277 0.145
slr1679 Forward -38 -29 16.0277 0.145
ssl3044 Reverse -82 -91 13.7661 0.24
slr1687 Forward -63 -54 13.7661 0.24
sll1557 Reverse -1 -10 15.0444 0.156
slr0948 Reverse -161 -170 12.1928 0.296
slr0950 Forward -134 -125 14.5527 0.212
slr0953 Forward -136 -127 12.4878 0.279
sll1532 Reverse -7 -16 17.306 0.145
slr1635 Forward -360 -351 17.306 0.145
sll1524 Forward -93 -84 14.7494 0.195
slr1644 Reverse -232 -241 14.7494 0.195
sll1520 Reverse -239 -248 16.0277 0.145
sll0268 Reverse -306 -315 12.5861 0.279
sll0260 Reverse -388 -397 14.5527 0.212
slr0287 Forward -191 -182 14.5527 0.212
slr0287 Reverse -164 -173 12.4878 0.279
slr0291 Forward -77 -68 15.0444 0.156
slr0399 Reverse -203 -212 12.5861 0.279
sll0148 Reverse -246 -255 14.7494 0.195
sll1860 Reverse -106 -115 17.306 0.145
slr1933 Forward -319 -310 17.306 0.145
slr0989 Reverse -324 -333 13.1761 0.277
sll0947 Forward -253 -244 12.2911 0.287
slr0994 Reverse -194 -203 12.2911 0.287
slr0329 Forward -300 -291 14.5527 0.212
sll0296 Forward -382 -373 15.0444 0.156
ssl0564 Forward -61 -52 15.0444 0.156
sll0176 Forward -59 -50 17.4043 0.145
sll0172 Reverse -186 -195 15.0444 0.156
sll0157 Reverse -80 -89 14.4544 0.224
sll0156 Reverse -16 -25 12.2911 0.287
slr0184 Forward -187 -178 12.2911 0.287
sll0751 Forward -173 -164 13.1761 0.277
slr0347 Reverse -381 -390 13.1761 0.277
sll0018 Forward -399 -390 16.0277 0.145
slr0020 Reverse -298 -307 13.1761 0.277
slr0021 Forward -119 -110 14.8477 0.189
slr0214 Forward -353 -344 13.1761 0.277
sll0207 Forward -255 -246 17.306 0.145
slr0434 Reverse -140 -149 14.5527 0.212
slr0436 Reverse -172 -181 13.7661 0.24
sll0067 Forward -361 -352 14.7494 0.195
slr0064 Forward -66 -57 17.306 0.145
slr0066 Reverse -376 -385 14.7494 0.195
sll0462 Reverse -318 -327 12.4878 0.279
sml0002 Forward -164 -155 14.7494 0.195
sll0689 Forward -208 -199 16.126 0.145
sll0680 Forward -186 -177 15.0444 0.156
sll0615 Forward -324 -315 15.0444 0.156
slr0418 Reverse -129 -138 14.7494 0.195
sll0380 Forward -121 -112 14.5527 0.212
sll0374 Forward -46 -37 12.5861 0.279
slr0427 Forward -198 -189 17.4043 0.145
slr0427 Forward -158 -149 14.8477 0.189
sll0188 Forward -211 -202 14.7494 0.195
slr0208 Reverse -83 -92 14.8477 0.189
sll0178 Forward -374 -365 17.306 0.145
sll0888 Reverse -177 -186 14.7494 0.195
slr0907 Forward -267 -258 16.126 0.145
slr0918 Reverse -356 -365 17.306 0.145
slr0924 Reverse -196 -205 16.0277 0.145
sll0544 Forward -267 -258 13.2744 0.277
slr1002 Reverse -264 -273 12.4878 0.279
slr0572 Reverse -147 -156 13.2744 0.277
slr0575 Reverse -328 -337 15.1427 0.156
slr0829 Reverse -5 -14 17.4043 0.145
sll0834 Forward -255 -246 13.2744 0.277
slr0836 Forward -367 -358 16.126 0.145
sll0828 Forward -276 -267 12.1928 0.296
sll0821 Reverse -12 -21 12.4878 0.279
slr0505 Reverse -277 -286 15.0444 0.156
slr0505 Reverse -91 -100 12.4878 0.279
sll0480 Reverse -237 -246 17.306 0.145
sll0474 Forward -312 -303 14.4544 0.224
sll0467 Forward -150 -141 12.4878 0.279
ssr1041 Forward -326 -317 12.2911 0.287
sll0587 Reverse -25 -34 14.4544 0.224
sll0586 Forward -55 -46 12.1928 0.296
slr0623 Reverse -309 -318 12.1928 0.296
sll0108 Reverse -360 -369 12.4878 0.279
sll0099 Forward -95 -86 14.7494 0.195
sll0099 Forward -162 -153 14.5527 0.212
slr0109 Forward -81 -72 16.0277 0.145
slr0111 Forward -127 -118 14.8477 0.189
slr0115 Forward -266 -257 13.1761 0.277
slr0120 Forward -294 -285 16.0277 0.145
slr0303 Forward -336 -327 12.1928 0.296
sll0283 Reverse -2 -11 14.4544 0.224
sll0282 Forward -38 -29 17.4043 0.145
sll0775 Forward -278 -269 14.5527 0.212
slr0697 Reverse -276 -285 14.5527 0.212
slr0698 Reverse -326 -335 14.7494 0.195
sll0677 Reverse -73 -82 17.4043 0.145
sll0660 Forward -243 -234 12.2911 0.287
slr0713 Reverse -57 -66 12.2911 0.287
sll0658 Forward -48 -39 14.5527 0.212
sll0040 Reverse -154 -163 13.4711 0.277
slr0044 Forward -267 -258 13.1761 0.277
slr0044 Reverse -9 -18 12.1928 0.296
sll0027 Reverse -169 -178 14.5527 0.212
sll0513 Forward -128 -119 16.126 0.145
slr0533 Reverse -61 -70 16.126 0.145
slr0534 Forward -285 -276 16.0277 0.145
slr0534 Reverse -43 -52 12.4878 0.279
slr0535 Forward -251 -242 14.5527 0.212
sll0509 Forward -327 -318 13.4711 0.277
sll0499 Forward -118 -109 16.0277 0.145
slr0544 Reverse -310 -319 16.0277 0.145
sll0493 Forward -257 -248 13.2744 0.277
sll0902 Forward -317 -308 12.4878 0.279
slr0926 Reverse -349 -358 14.4544 0.224
slr0930 Forward -105 -96 14.4544 0.224
slr1424 Forward -246 -237 13.2744 0.277
sll0624 Forward -115 -106 16.0277 0.145
slr0662 Reverse -300 -309 16.0277 0.145
sll0622 Forward -143 -134 12.1928 0.296
slr1556 Forward -63 -54 16.0277 0.145
slr1577 Reverse -190 -199 16.0277 0.145
sll1479 Forward -375 -366 14.5527 0.212
sll1472 Reverse -127 -136 13.4711 0.277
ssl1378 Forward -232 -223 16.0277 0.145
sll0727 Reverse -82 -91 17.306 0.145
slr0758 Reverse -139 -148 14.7494 0.195
slr1656 Reverse -189 -198 12.1928 0.296
slr1659 Reverse -303 -312 14.8477 0.189
sll1547 Reverse -171 -180 15.0444 0.156
sll1546 Reverse -165 -174 14.8477 0.189
slr1661 Forward -325 -316 14.8477 0.189
slr0457 Reverse -312 -321 12.5861 0.279
slr1178 Forward -62 -53 14.7494 0.195
sll0577 Forward -353 -344 13.1761 0.277
slr0589 Reverse -265 -274 13.1761 0.277
sll0569 Reverse -300 -309 13.2744 0.277
sll0567 Forward -169 -160 12.4878 0.279
sll5033 Forward -115 -106 16.0277 0.145
sll5044 Forward -144 -135 16.0277 0.145
sll5075 Reverse -98 -107 14.5527 0.212
ssl5113 Reverse -366 -375 16.126 0.145
ssl5114 Reverse -38 -47 16.126 0.145
slr5115 Forward -128 -119 16.126 0.145
sll5128 Forward -238 -229 12.2911 0.287
ssl5129 Forward -356 -347 13.7661 0.24
slr7012 Forward -351 -342 14.4544 0.224
slr7052 Forward -395 -386 12.1928 0.296
sll7064 Forward -222 -213 13.4711 0.277
sll7078 Reverse -167 -176 16.0277 0.145
slr7080 Forward -62 -53 16.0277 0.145
ssr7084 Forward -313 -304 14.7494 0.195
sll7089 Reverse -96 -105 14.8477 0.189
sll8001 Forward -344 -335 16.126 0.145
slr6029 Forward -386 -377 13.5694 0.266
slr6029 Forward -230 -221 13.2744 0.277
slr6088 Forward -386 -377 13.5694 0.266
slr6088 Forward -230 -221 13.2744 0.277
slr6108 Reverse -126 -135 13.2744 0.277
6803t27 Forward -220 -211 14.4544 0.224
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  1.000  0.000  
0.000 0.143 0.857 0.000
0.143 0.000 0.857 0.000
0.571 0.000 0.429 0.000
0.000 0.000 0.857 0.143
0.857 0.000 0.143 0.000
0.714 0.000 0.000 0.286
0.143 0.000 0.000 0.857
0.000 0.000 0.000 1.000
1.000 0.000 0.000 0.000