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Details for NP_439918.1_3

Name NP_439918.1_3
Length 20
Regular expression GT[TG]G[GA][TC]GA[AT]CG[GTC][TG][TC]TGG[TA]GA
Central No

Motif logo

Genes containing this motif

266 unique genes found. Note that a gene can occur multiple times in the table below since a motif can be assigned to more than one position in its promoter.

Table filtering
ORF Direction Start Stop Score q-value
sll1212 Reverse -74 -93 6.78429 0.264
sll1202 Forward -340 -321 30.4821 0.0000611
slr1491 Forward -257 -238 7.7676 0.252
slr1493 Forward -373 -354 11.7992 0.21
sll1401 Forward -343 -324 7.96426 0.252
sll1394 Forward -371 -352 8.75091 0.252
sll1060 Forward -375 -356 5.30933 0.264
sll1060 Reverse -366 -385 2.3594 0.295
ssl2069 Forward -188 -169 5.30933 0.264
ssl2069 Reverse -179 -198 2.3594 0.295
ssr1853 Reverse -81 -100 5.30933 0.264
ssr1853 Forward -90 -71 2.3594 0.295
sll1052 Forward -257 -238 7.17762 0.264
sll0716 Forward -304 -285 4.22769 0.264
sll0712 Reverse -356 -375 3.6377 0.266
slr0723 Reverse -117 -136 3.24438 0.266
slr0730 Reverse -2 -21 9.73422 0.249
slr0731 Forward -291 -272 3.73603 0.266
sll0704 Reverse -70 -89 7.7676 0.252
slr0732 Forward -106 -87 7.7676 0.252
slr0741 Forward -128 -109 2.45773 0.294
slr0250 Reverse -342 -361 3.24438 0.266
sll1324 Forward -358 -339 9.83255 0.249
ssl2615 Reverse -118 -137 2.75272 0.281
sll1040 Reverse -97 -116 4.62101 0.264
slr1093 Forward -133 -114 4.62101 0.264
slr1096 Reverse -50 -69 3.24438 0.266
slr1098 Forward -166 -147 5.211 0.264
slr1104 Reverse -224 -243 2.85105 0.277
sll1037 Reverse -283 -302 5.01433 0.264
slr1793 Forward -362 -343 9.53756 0.249
sll1191 Reverse -299 -318 7.57094 0.252
slr0981 Reverse -48 -67 4.22769 0.264
slr1614 Reverse -268 -287 4.12936 0.265
slr1615 Forward -113 -94 5.01433 0.264
sll1024 Reverse -346 -365 7.37428 0.263
sll0650 Forward -300 -281 7.57094 0.252
sll0641 Forward -125 -106 4.22769 0.264
slr1042 Reverse -163 -182 8.35759 0.252
slr1043 Forward -314 -295 5.80098 0.264
slr1052 Forward -324 -305 8.25926 0.252
slr1052 Forward -210 -191 3.73603 0.266
sll1009 Forward -325 -306 5.11266 0.264
slr1055 Reverse -163 -182 5.11266 0.264
ssl1918 Forward -223 -204 4.32602 0.264
slr1753 Reverse -9 -28 4.32602 0.264
sll1643 Reverse -310 -329 3.73603 0.266
slr1848 Forward -231 -212 7.07928 0.264
smr0008 Forward -81 -62 8.45592 0.252
slr2035 Forward -285 -266 8.45592 0.252
slr2036 Reverse -366 -385 4.52268 0.264
sll1942 Forward -111 -92 10.4225 0.249
slr2041 Reverse -165 -184 5.50599 0.264
slr2044 Reverse -10 -29 4.71934 0.264
slr2048 Reverse -82 -101 11.0125 0.249
slr2053 Forward -258 -239 8.55425 0.252
sll1932 Forward -254 -235 2.3594 0.295
slr1918 Forward -228 -209 3.83436 0.266
sll1830 Forward -224 -205 4.52268 0.264
slr1022 Reverse -381 -400 4.62101 0.264
slr1023 Forward -325 -306 2.65439 0.288
slr1031 Reverse -206 -225 2.55606 0.294
sll0981 Reverse -32 -51 5.89931 0.264
sll0980 Reverse -290 -309 6.29264 0.264
slr1377 Reverse -84 -103 12.6841 0.172
sll1298 Reverse -304 -323 4.22769 0.264
slr1383 Forward -363 -344 4.22769 0.264
ssr2333 Forward -193 -174 4.32602 0.264
ssl2542 Reverse -293 -312 2.3594 0.295
sll1283 Forward -333 -314 4.81767 0.264
ssr2843 Forward -347 -328 3.44104 0.266
slr1703 Reverse -70 -89 6.29264 0.264
slr2012 Reverse -234 -253 2.75272 0.281
sll1924 Reverse -110 -129 4.81767 0.264
slr2015 Forward -341 -322 4.81767 0.264
slr1137 Reverse -197 -216 6.19431 0.264
slr1902 Reverse -237 -256 16.1257 0.113
sll1124 Reverse -204 -223 4.32602 0.264
sll1123 Reverse -301 -320 10.0292 0.249
slr1196 Forward -85 -66 5.211 0.264
slr1197 Forward -322 -303 4.22769 0.264
slr1203 Forward -200 -181 4.22769 0.264
ssl3335 Forward -361 -342 4.52268 0.264
slr1535 Forward -303 -284 6.19431 0.264
slr1552 Forward -194 -175 4.03102 0.266
slr1220 Reverse -6 -25 6.4893 0.264
sll1138 Forward -55 -36 4.22769 0.264
slr1226 Reverse -57 -76 4.22769 0.264
slr1240 Forward -339 -320 4.81767 0.264
ssr2067 Reverse -104 -123 2.94938 0.271
slr1434 Reverse -375 -394 2.94938 0.271
ssr2422 Reverse -244 -263 3.04771 0.271
slr1448 Reverse -257 -276 5.11266 0.264
sll0877 Reverse -49 -68 2.45773 0.294
slr0875 Forward -78 -59 2.45773 0.294
ssl1633 Reverse -100 -119 4.916 0.264
slr0891 Forward -198 -179 3.34271 0.266
ssl2598 Reverse -185 -204 5.11266 0.264
slr1409 Reverse -263 -282 7.86593 0.252
sll1780 Reverse -371 -390 5.211 0.264
sll1768 Reverse -149 -168 5.11266 0.264
sll1768 Forward -208 -189 4.62101 0.264
sll1765 Forward -293 -274 13.7658 0.172
sll1765 Forward -242 -223 8.94757 0.252
sll1765 Forward -191 -172 5.99764 0.264
ssl3291 Forward -103 -84 5.01433 0.264
sll1693 Forward -205 -186 16.1257 0.113
slr1818 Reverse -373 -392 3.24438 0.266
sll1629 Reverse -90 -109 3.73603 0.266
slr1735 Forward -103 -84 5.89931 0.264
sll1625 Forward -178 -159 3.73603 0.266
slr1743 Reverse -289 -308 14.3558 0.172
sll0855 Reverse -284 -303 2.3594 0.295
sll0848 Forward -121 -102 16.3224 0.113
slr0872 Forward -141 -122 5.01433 0.264
slr1251 Forward -201 -182 6.98095 0.264
slr1254 Forward -130 -111 4.81767 0.264
slr1255 Reverse -87 -106 5.40766 0.264
slr1255 Reverse -115 -134 3.14605 0.269
slr1256 Reverse -187 -206 3.6377 0.266
slr1263 Reverse -295 -314 3.44104 0.266
sll1958 Reverse -243 -262 4.42435 0.264
slr1994 Forward -258 -239 2.45773 0.294
sll1615 Forward -246 -227 10.0292 0.249
sll1605 Forward -258 -239 3.93269 0.266
slr1718 Reverse -5 -24 3.93269 0.266
slr1721 Forward -380 -361 3.34271 0.266
slr1721 Forward -197 -178 3.34271 0.266
slr1731 Reverse -173 -192 10.4225 0.249
sll0238 Forward -369 -350 5.01433 0.264
sll0236 Reverse -377 -396 3.24438 0.266
ssr3532 Reverse -205 -224 2.26107 0.297
slr2095 Forward -20 -1 4.03102 0.266
slr2096 Forward -334 -315 4.03102 0.266
sll1415 Reverse -154 -173 5.80098 0.264
slr2121 Reverse -90 -109 5.01433 0.264
slr2131 Forward -279 -260 3.53937 0.266
slr0808 Reverse -227 -246 6.19431 0.264
slr0813 Reverse -53 -72 3.14605 0.269
sll1252 Reverse -38 -57 13.2741 0.172
slr1344 Forward -29 -10 13.2741 0.172
sll1249 Reverse -329 -348 3.44104 0.266
slr1350 Reverse -250 -269 7.57094 0.252
sll1242 Forward -105 -86 3.34271 0.266
slr1956 Reverse -28 -47 3.34271 0.266
slr1957 Forward -215 -196 3.83436 0.266
sll1898 Reverse -355 -374 3.14605 0.269
ssl3573 Forward -311 -292 20.8456 0.0457
slr1964 Forward -256 -237 3.53937 0.266
slr1975 Forward -306 -287 3.6377 0.266
sll1873 Forward -325 -306 4.32602 0.264
slr1470 Reverse -217 -236 8.45592 0.252
slr1470 Reverse -286 -305 6.09597 0.264
slr1278 Reverse -361 -380 7.86593 0.252
slr1281 Reverse -160 -179 3.44104 0.266
sll1433 Reverse -197 -216 8.75091 0.252
sll1099 Reverse -81 -100 7.66927 0.252
ssl2148 Forward -149 -130 4.22769 0.264
slr1164 Reverse -153 -172 4.22769 0.264
sll1089 Forward -349 -330 3.04771 0.271
sll1561 Reverse -11 -30 14.0608 0.172
slr1681 Forward -339 -320 14.0608 0.172
slr0946 Forward -204 -185 3.6377 0.266
slr0947 Forward -169 -150 8.16093 0.252
sll0909 Reverse -201 -220 3.6377 0.266
slr1646 Forward -351 -332 13.0775 0.172
sll1522 Forward -249 -230 23.4022 0.0191
sll1521 Reverse -335 -354 5.50599 0.264
sll0427 Forward -377 -358 8.75091 0.252
sll0419 Forward -315 -296 3.83436 0.266
sll0273 Reverse -306 -325 9.73422 0.249
sll0273 Reverse -222 -241 5.60432 0.264
sll0270 Reverse -127 -146 3.6377 0.266
sll0364 Reverse -285 -304 10.3242 0.249
slr0399 Reverse -364 -383 10.6192 0.249
slr0162 Reverse -314 -333 6.68596 0.264
slr0164 Reverse -272 -291 5.50599 0.264
sll1854 Forward -334 -315 7.57094 0.252
sll1841 Forward -140 -121 2.45773 0.294
slr1949 Reverse -71 -90 2.45773 0.294
slr1950 Reverse -352 -371 6.29264 0.264
sll0944 Reverse -377 -396 3.53937 0.266
slr0325 Reverse -342 -361 3.73603 0.266
sll0297 Forward -218 -199 3.83436 0.266
slr0186 Reverse -252 -271 3.04771 0.271
slr0366 Reverse -264 -283 4.22769 0.264
slr0381 Forward -216 -197 5.89931 0.264
slr0769 Reverse -290 -309 3.04771 0.271
slr0771 Forward -73 -54 5.01433 0.264
sll0772 Forward -395 -376 3.24438 0.266
sll0753 Reverse -373 -392 4.52268 0.264
sll0750 Reverse -374 -393 6.68596 0.264
slr0342 Reverse -288 -307 2.26107 0.297
slr0343 Forward -268 -249 5.30933 0.264
slr0343 Forward -182 -163 3.53937 0.266
slr0356 Forward -282 -263 3.24438 0.266
sll0309 Forward -368 -349 4.52268 0.264
slr0049 Reverse -121 -140 16.7157 0.113
sll0070 Reverse -349 -368 5.89931 0.264
sll0067 Forward -68 -49 3.34271 0.266
slr0056 Forward -279 -260 4.42435 0.264
slr0474 Reverse -96 -115 5.70265 0.264
slr0492 Reverse -347 -366 4.42435 0.264
sll0685 Forward -124 -105 4.81767 0.264
sll0684 Forward -135 -116 12.7825 0.172
sll0679 Reverse -126 -145 6.4893 0.264
slr0719 Forward -132 -113 6.4893 0.264
sll0613 Reverse -249 -268 3.14605 0.269
sll0613 Reverse -237 -256 2.26107 0.297
sll0609 Forward -210 -191 16.1257 0.113
slr0417 Reverse -310 -329 9.53756 0.249
sll0383 Forward -291 -272 4.12936 0.265
slr0421 Reverse -379 -398 3.04771 0.271
sll0372 Forward -386 -367 5.89931 0.264
sll0371 Reverse -147 -166 3.24438 0.266
slr0192 Forward -198 -179 3.44104 0.266
slr0209 Forward -348 -329 7.7676 0.252
slr0919 Reverse -218 -237 12.9791 0.172
sll0552 Reverse -225 -244 5.11266 0.264
slr0581 Forward -196 -177 6.09597 0.264
sll0086 Reverse -310 -329 2.55606 0.294
slr0082 Forward -392 -373 7.96426 0.252
sll0474 Forward -360 -341 9.83255 0.249
slr0626 Reverse -380 -399 2.3594 0.295
sll0738 Reverse -28 -47 2.94938 0.271
slr0039 Reverse -63 -82 4.32602 0.264
sll0027 Forward -261 -242 8.75091 0.252
sll0513 Forward -169 -150 2.94938 0.271
slr0533 Reverse -20 -39 2.94938 0.271
slr0536 Reverse -320 -339 4.81767 0.264
sll0509 Reverse -200 -219 11.3075 0.238
sll0508 Forward -24 -5 2.26107 0.297
slr0537 Reverse -212 -231 2.26107 0.297
slr0542 Forward -290 -271 2.45773 0.294
ssr1558 Forward -247 -228 4.916 0.264
sll0900 Forward -130 -111 4.32602 0.264
sll0528 Forward -222 -203 7.07928 0.264
sll1342 Reverse -210 -229 2.94938 0.271
slr1423 Forward -45 -26 2.94938 0.271
slr1424 Reverse -359 -378 6.78429 0.264
sll1329 Reverse -165 -184 6.39097 0.264
slr1451 Forward -138 -119 13.2741 0.172
sll0629 Reverse -4 -23 2.26107 0.297
sll1496 Reverse -165 -184 7.07928 0.264
slr1565 Forward -81 -62 12.4875 0.172
slr1566 Reverse -290 -309 2.85105 0.277
sll1491 Forward -37 -18 5.89931 0.264
sll1485 Reverse -250 -269 6.58763 0.264
sll0736 Forward -122 -103 9.24257 0.252
slr0752 Reverse -317 -336 5.60432 0.264
sll0729 Forward -251 -232 7.96426 0.252
sll1550 Forward -175 -156 5.80098 0.264
sll1542 Forward -256 -237 9.63589 0.249
slr0453 Forward -338 -319 5.70265 0.264
sll0436 Reverse -282 -301 8.06259 0.252
slr0459 Forward -301 -282 4.22769 0.264
slr1186 Forward -360 -341 3.73603 0.266
sll0572 Forward -322 -303 4.12936 0.265
slr0608 Reverse -274 -293 7.17762 0.264
slr0608 Reverse -251 -270 3.24438 0.266
slr5021 Reverse -106 -125 2.75272 0.281
ssl5070 Reverse -316 -335 9.0459 0.252
slr5116 Reverse -55 -74 3.34271 0.266
sll5122 Forward -165 -146 10.0292 0.249
ssl5125 Reverse -140 -159 7.86593 0.252
slr5126 Forward -350 -331 7.86593 0.252
sll7003 Forward -170 -151 6.98095 0.264
sll7034 Forward -131 -112 3.34271 0.266
ssr7035 Reverse -322 -341 3.34271 0.266
slr7060 Reverse -242 -261 3.73603 0.266
slr7081 Reverse -148 -167 5.30933 0.264
sll7087 Reverse -15 -34 5.211 0.264
slr7088 Forward -50 -31 5.211 0.264
ssl8024 Reverse -191 -210 3.34271 0.266
sll8033 Forward -383 -364 10.3242 0.249
slr8036 Forward -114 -95 12.4875 0.172
slr8038 Forward -214 -195 3.44104 0.266
6803t01 Reverse -101 -120 4.12936 0.265
6803t03 Reverse -229 -248 3.73603 0.266
6803t09 Forward -177 -158 4.52268 0.264
ORF Direction Start Stop Score q-value

TOMTOM

TOMTOM is an application for comparing motifs to known motifs in existing databases. Here's the possibility of running TOMTOM on this motif against the Prodoric or RegTransBase database. It can take up to 1 minute before the results show up, depending on server load. If you want to run TOMTOM against other databases, or with more custom settings, please visit the TOMTOM website.

Options

PSPM

0.000  0.000  0.875  0.125  
0.000 0.000 0.125 0.875
0.000 0.125 0.250 0.625
0.125 0.000 0.875 0.000
0.250 0.000 0.750 0.000
0.000 0.250 0.125 0.625
0.000 0.000 1.000 0.000
0.875 0.000 0.125 0.000
0.375 0.125 0.125 0.375
0.000 1.000 0.000 0.000
0.000 0.000 0.875 0.125
0.000 0.250 0.375 0.375
0.000 0.125 0.250 0.625
0.000 0.250 0.000 0.750
0.000 0.000 0.000 1.000
0.000 0.000 1.000 0.000
0.125 0.125 0.750 0.000
0.375 0.125 0.000 0.500
0.125 0.000 0.875 0.000
1.000 0.000 0.000 0.000