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Details for slr1400

ORF slr1400
Accession NP_440273.1
Symbol hik38
Category two-component hybrid sensor and regulator
Definition Regulatory functions
Regulatory function Yes
External resources CyanoBase, KEGG, NCBI

Promoter profile

Table filtering
Motif Direction Start Stop Central FIMO score FIMO q-value
NP_440795.1_7 Reverse -308 -315 6.92228 0.26
NP_441453.1_7 Forward -223 -216 11.9372 0.298
NP_440226.1_2 Forward -215 -197 16.0967 0.181
NP_442623.1_1 Reverse -238 -257 0.786102 0.122
NP_443027.1_4 Reverse -188 -198 8.73149 0.191
NP_443027.1_4 Forward -196 -186 6.8632 0.262
NP_441859.1_3 Reverse -237 -256 14.6499 0.0704
NP_440916.1_1 Reverse -253 -267 11.2093 0.206
NP_439918.1_2 Forward -334 -315 4.62101 0.163
NP_439918.1_2 Forward -340 -321 -0.197208 0.227
NP_442110.1_7 Forward -26 -12 0.982901 0.241
NP_440273.1_3 Forward -340 -321 21.5339 0.0179
NP_440856.1_7 Reverse -274 -293 -6.68705 0.246
NP_441149.1_7 Reverse -120 -139 2.85105 0.267
NP_441738.1_2 Reverse -42 -49 6.72528 0.236
NP_442889.1_10 Forward -217 -198 14.4603 0.149
NP_440056.1_1 Reverse -314 -333 18.0924 0.0631
NP_441713.1_1 Reverse -11 -30 -12.3902 0.244
NP_442570.1_3 Forward -331 -312 -6.68705 0.259
NP_441792.1_5 Forward -306 -290 8.12167 0.283
NP_441327.1_5 Forward -264 -255 14.356 0.192
NP_441847.1_9 Reverse -244 -262 8.86894 0.269
NP_440403.1_10 Forward -295 -276 2.55606 0.279
NP_440842.1_10 Reverse -312 -326 10.816 0.251
NP_440057.1_1 Reverse -314 -333 15.3391 0.142
NP_440057.1_4 Reverse -314 -333 14.2828 0.222
NP_442848.1_9 Forward -322 -303 13.6675 0.123
NP_442191.1_4 Reverse -116 -130 11.7688 0.244
NP_442485.1_3 Forward -135 -116 -0.000545616 0.25
NP_441846.1_10 Forward -279 -260 -23.4033 0.285
NP_440642.1_10 Reverse -257 -271 6.0955 0.238
NP_440642.1_10 Reverse -258 -272 1.37564 0.293
NP_440360.1_10 Forward -290 -276 2.45787 0.265
NP_442544.1_2 Reverse -47 -61 6.78443 0.217
NP_440184.1_7 Forward -158 -139 14.6558 0.277
NP_442486.1_4 Reverse -77 -96 7.47261 0.273
NP_442690.1_1 Forward -163 -144 -7.67036 0.177
NP_442911.1_2 Forward -257 -238 -6.98204 0.197
NP_440993.1_4 Reverse -314 -331 5.64371 0.261
NP_442002.1_1 Forward -92 -74 -9.12563 0.272
NP_441654.1_5 Reverse -359 -378 16.2091 0.216
NP_440106.1_2 Forward -346 -328 11.6222 0.28
NP_441646.1_1 Forward -323 -304 1.0811 0.237
NP_441550.1_7 Forward -216 -197 19.1438 0.232
NP_440260.1_8 Reverse -265 -283 -4.70074 0.273
NP_441514.1_6 Forward -50 -43 12.8221 0.252
NP_443030.1_1 Forward -384 -367 9.38028 0.207
NP_443049.1_6 Reverse -237 -247 11.2506 0.269
NP_442029.1_10 Forward -147 -128 5.60432 0.284
NP_442554.1_8 Forward -198 -188 2.33998 0.274
NP_441865.1_5 Forward -273 -254 22.7139 0.0598
NP_440379.1_5 Reverse -8 -27 -11.4069 0.296
NP_439939.1_4 Reverse -248 -267 6.09597 0.199
NP_439939.1_4 Reverse -199 -218 1.27776 0.199
NP_441020.2_7 Reverse -315 -334 13.6666 0.166
NP_440742.1_6 Reverse -14 -33 15.8307 0.175
NP_442253.1_5 Forward -326 -309 -7.23765 0.298
NP_441826.1_2 Reverse -331 -345 -4.22864 0.293
NP_442490.1_9 Forward -322 -303 0.196116 0.175
NP_442719.1_2 Forward -148 -130 -11.1913 0.29
NP_441176.1_1 Forward -271 -252 11.9958 0.19
NP_442050.1_8 Reverse -12 -31 12.1397 0.272
NP_442342.1_9 Forward -249 -233 3.59845 0.26
NP_441114.1_4 Reverse -163 -174 18.3482 0.228
NP_440558.1_2 Reverse -328 -347 -3.24547 0.234
NP_441048.1_4 Reverse -161 -180 8.65258 0.283
NP_441878.1_6 Forward -323 -313 -6.41148 0.191
NP_441445.1_1 Forward -179 -160 0.196116 0.281
NP_442795.1_10 Reverse -176 -195 12.9791 0.28
NP_442777.1_3 Reverse -64 -82 0.116744 0.297
NP_440084.1_8 Forward -216 -202 9.56081 0.282
NP_442192.1_8 Reverse -303 -322 13.6675 0.234
NP_441819.1_5 Reverse -130 -149 12.8432 0.232
NP_442444.1_6 Forward -345 -327 12.437 0.272
NP_441728.2_4 Reverse -144 -163 15.517 0.213
NP_442998.1_5 Forward -263 -253 14.7297 0.149
NP_440899.1_8 Forward -256 -237 0.786102 0.177
NP_442007.1_8 Forward -293 -275 11.4247 0.258
NP_441559.1_8 Reverse -303 -317 -5.9986 0.271
NP_440327.1_6 Forward -334 -315 18.4857 0.0749
NP_441254.1_2 Forward -173 -154 9.24257 0.211
NP_440586.1_8 Reverse -239 -246 8.88855 0.205
NP_443039.1_7 Reverse -326 -340 5.99717 0.197
NP_440408.1_10 Reverse -343 -362 8.45592 0.176
NP_440819.1_5 Forward -125 -117 7.98423 0.228
NP_440819.1_5 Forward -126 -118 6.41093 0.285
NP_440267.1_2 Reverse -167 -181 5.1122 0.281
NP_442887.1_5 Reverse -245 -264 -13.0786 0.281
NP_441018.1_7 Reverse -288 -307 10.9142 0.194
NP_440350.1_1 Forward -339 -320 -5.60541 0.293
NP_442280.1_10 Forward -333 -315 5.84403 0.281
NP_441592.1_4 Reverse -307 -326 2.45773 0.196
NP_441103.1_9 Reverse -256 -266 12.4895 0.291
NP_441894.1_1 Reverse -121 -140 -5.50708 0.265
NP_440349.1_3 Forward -345 -326 9.63507 0.299
NP_440519.1_3 Forward -334 -315 18.584 0.0809
NP_440504.1_7 Reverse -308 -327 -4.42544 0.29
NP_440454.1_2 Reverse -144 -158 16.1498 0.163
NP_440673.1_3 Forward -245 -238 9.38056 0.192
NP_442219.1_8 Reverse -303 -322 8.65027 0.241
NP_440222.1_7 Reverse -258 -277 14.3558 0.227
NP_441719.1_6 Reverse -257 -276 5.89851 0.288
NP_442366.1_5 Forward -319 -309 11.3859 0.189
NP_442206.1_2 Reverse -13 -32 13.4708 0.254
NP_440864.1_9 Reverse -13 -32 -5.80207 0.239
NP_440593.1_3 Reverse -302 -321 -3.04881 0.231
NP_440355.1_2 Reverse -286 -305 16.1249 0.0928
NP_442689.1_8 Forward -159 -142 5.84037 0.155
NP_441409.1_6 Forward -205 -186 -9.24366 0.18
NP_442843.1_1 Forward -267 -248 0.294447 0.17
NP_442843.1_1 Forward -345 -326 -9.53865 0.266
NP_441124.1_5 Reverse -198 -208 12.4352 0.221
NP_440431.1_3 Reverse -189 -208 -11.2103 0.284
NP_440588.1_2 Forward -326 -307 -5.70374 0.259
NP_442006.1_2 Reverse -313 -330 -8.61428 0.197
NP_440078.1_10 Reverse -12 -31 6.98095 0.218
NP_442443.1_1 Forward -131 -112 -4.52377 0.272
NP_441333.1_1 Forward -255 -245 12.8292 0.221
NP_441732.1_2 Forward -282 -266 -17.1494 0.24
NP_443011.1_5 Reverse -284 -303 12.0942 0.256
NP_441040.1_2 Forward -332 -313 -5.9004 0.181
NP_440352.1_5 Forward -273 -254 16.8412 0.096
NP_440486.1_6 Forward -291 -272 6.39097 0.283
NP_440459.1_2 Forward -29 -12 8.69197 0.253
NP_440010.1_10 Forward -327 -308 3.24438 0.264
NP_442551.1_4 Reverse -305 -320 -3.75668 0.295
NP_440847.1_3 Reverse -174 -188 11.9953 0.254
NP_442603.1_7 Forward -316 -302 9.93039 0.137
NP_441329.1_3 Reverse -196 -206 12.0145 0.273
NP_441329.1_6 Forward -57 -38 1.76618 0.231
NP_441973.1_1 Reverse -257 -272 0.766545 0.235
NP_442021.1_3 Forward -340 -321 -6.98204 0.261
NP_440594.1_6 Forward -322 -303 6.98015 0.257
NP_440594.1_6 Forward -176 -157 6.98015 0.257
NP_440590.1_4 Forward -20 -7 -1.06236 0.21
NP_440590.1_4 Reverse -232 -245 -2.24233 0.239
NP_440227.1_2 Forward -210 -194 7.63002 0.295
NP_441951.1_6 Forward -395 -376 9.93088 0.253
NP_440156.1_4 Reverse -252 -262 11.9759 0.176
NP_441727.1_3 Reverse -10 -29 13.5691 0.116
NP_442044.1_1 Forward -283 -264 -5.50708 0.188
NP_442216.1_4 Reverse -41 -49 15.3586 0.255
NP_441617.1_6 Reverse -253 -272 -7.37537 0.292
NP_442052.1_8 Forward -318 -308 12.0747 0.287
NP_442499.1_1 Forward -283 -264 4.71934 0.226
NP_442479.1_9 Forward -210 -191 -7.57203 0.266
NP_442402.1_10 Forward -207 -197 10.501 0.288
NP_441848.1_4 Reverse -144 -160 11.0839 0.232
NP_441848.1_7 Reverse -249 -268 7.76679 0.196
NP_440696.1_3 Forward -334 -316 -2.73412 0.279
NP_441811.1_1 Forward -323 -304 3.83436 0.299
NP_442679.1_1 Reverse -236 -255 -2.16383 0.24
NP_441959.1_1 Reverse -143 -161 16.1446 0.228
NP_442533.1_6 Reverse -314 -323 3.63797 0.206
NP_442541.1_10 Forward -322 -308 3.14559 0.254
NP_441028.1_6 Reverse -256 -266 5.38779 0.255
NP_441527.1_7 Forward -165 -146 12.9783 0.282
NP_440007.1_9 Reverse -8 -22 5.60446 0.251
NP_442306.1_3 Reverse -236 -255 13.5691 0.216
NP_442213.1_5 Reverse -297 -316 2.55606 0.237
NP_442264.1_2 Forward -356 -339 6.52869 0.254
NP_442794.1_1 Forward -203 -191 3.18557 0.286
NP_441962.1_4 Forward -25 -6 -10.522 0.229
NP_441962.1_4 Forward -321 -302 -11.4069 0.241
NP_441993.1_1 Forward -340 -321 2.53143 0.257
NP_442224.1_1 Reverse -121 -140 -5.80207 0.284
NP_442323.1_7 Reverse -248 -267 1.37531 0.281
NP_440293.1_3 Forward -330 -311 -0.590531 0.232
NP_439988.1_3 Forward -327 -313 18.1908 0.144
NP_442930.1_1 Reverse -252 -262 13.3526 0.239
NP_442930.1_1 Reverse -202 -212 12.6642 0.239
NP_442930.1_1 Forward -209 -199 11.4843 0.258
NP_442930.1_1 Reverse -251 -261 11.091 0.26
NP_440502.1_7 Forward -226 -207 12.2908 0.291
NP_442867.1_8 Forward -330 -311 4.71934 0.277
NP_442680.1_5 Reverse -236 -255 -0.416223 0.284
NP_442130.1_8 Reverse -11 -30 11.11 0.125
NP_441489.1_3 Reverse -194 -208 8.5104 0.235
NP_440524.1_2 Reverse -333 -352 -4.52377 0.276
NP_441173.1_9 Forward -34 -26 9.85212 0.275
NP_442395.2_4 Forward -282 -263 -0.29631 0.288
NP_440507.2_8 Forward -267 -248 11.7008 0.0776
NP_441122.1_1 Forward -327 -312 3.12649 0.285
NP_442495.1_4 Reverse -273 -283 12.6647 0.218
NP_442495.1_5 Forward -327 -308 18.3873 0.103
NP_442373.1_1 Reverse -305 -324 -11.2103 0.29
NP_440216.1_9 Forward -222 -213 13.2744 0.197
NP_440216.1_9 Forward -345 -336 7.96454 0.286
NP_440216.1_9 Reverse -339 -348 5.60459 0.292
NP_440261.1_5 Reverse -239 -252 -5.09393 0.185
Motif Direction Start Stop Central FIMO score FIMO q-value

Expression profile

Sequences

Promoter

TACTAAAACTGCTGCAGCTAGTAAGAATAGATTATTGATTGCATAGGTAACTTCTGCAATGGAAGTGGTTTCCGTTTGGGCTTGGGCCACCCCGACAAATAAAAATGCCAGCATGGCGCCCAGGACATAACGAGCAAGGGGAAAATTTTTCGGTTTCATCGCCTATACTAAATCAACTCCCTGGAAAAGTGAAATTTTTCTCAAGATGGCATCTTAGGAGGGAATGAATTGTTCACTGCCAACTTTTGTTACTGTTTGTCCACAATTTGCCGGCCCGGGAAAAGCAGTACTCTGATGATATTTGGGCTCCAATCTAGTGGAACGAGGAAGTGCACGGTACACTGAAAAAGAGGGGAATGAATCCTCTTCTGCAAAGCATTAGCATCGGCAGTAACGCTCT

CDS

ATGGGAACAGCTTCCCTTCTGGTGGCAGATGACGATCCCGATAATTTCGACGTTATCGATGCCCTCTTAGCGGACCAGGGTTATGAACTCAACTACGCCGATAGTGGCCAACGAGCTATTGACAATCTAGATACCTTTCAGCCGGACCTCCTGTTGCTTGATGTCATGATGCCGGGGCTAAGTGGCGTTGAAGTTTGTCGGATGATTCGTGCTTCGGCTCGGTGGCATGCCCTGCCAATTATTATGGTGACGGCCCTGGATAGTAAACTTAGCTTGGCTAATTGTTTGGCGGCGGGGGCAGATGATTTTATCTCCAAGCCCTTGAACGGATTGGAGTTACAGGCCCGTATCCAGGCCATGTTGCGACTGAAGCACCAGTATGATGCTTTGGGCAATTTGCTGCAACAACGGGAATCAATGGTGCACATGATTGTCCACGATTTACGCAATCCCCTCACTAATCTGATTTTGGGGATACAGGTTTTGCAGAGGAGTCATTCTGATGCTCCCTTGCCCCCGGAAAGACTTGATCGCCTGCTCCAGGCCGGGCAACAAATCCAGCATTTAGTGGATGATATGTTGGTGGTGTCTAAACAGGAACATGGCAAGATTCGTCTGGACTATCAAGAAGTCGACCTGTTGGCATTAATGGGGACTGTGCTGGATGATTACGAGGCGATCGCCAGCCAAAAACAATTAACCCTGGTACGGACATGGGAAAATAAGCCCTTAGTTGCAAAAATAGATCCCCCCATTTTTCAGCGTATTATTAGTAACTTGCTCAGCAATGCGATTAAGTTTTCCCCCACGGGCGCAAAGGTGGAGGTGGCGATCATAACGGAAGATAAGGATAAAGTCACCATCTGCTTCATTGACCAAGGGCCAGGTATTAAGGACGAACTTAAGCTCAAAATTTTTGAGCCCTATGAAGTGGGCACCATCATGCCCAACATTGCCCAAATTGGCTTGGGTCTGGCATTCTGTAAGATGATGAGCGAAGCCCATGGCGGTGCCATCACAGTCCAAGATAATCAGCCCAGGGGAGCGATGTTTTCCCTGACATTGCCCCAGCATCCTCCGGTGCCATTCGGTTGGATGCCCCATGACCAATGGAGAGGAGCAGCGGTGGATATCGGGAAATAA

Protein

MGTASLLVADDDPDNFDVIDALLADQGYELNYADSGQRAIDNLDTFQPDLLLLDVMMPGLSGVEVCRMIRASARWHALPIIMVTALDSKLSLANCLAAGADDFISKPLNGLELQARIQAMLRLKHQYDALGNLLQQRESMVHMIVHDLRNPLTNLILGIQVLQRSHSDAPLPPERLDRLLQAGQQIQHLVDDMLVVSKQEHGKIRLDYQEVDLLALMGTVLDDYEAIASQKQLTLVRTWENKPLVAKIDPPIFQRIISNLLSNAIKFSPTGAKVEVAIITEDKDKVTICFIDQGPGIKDELKLKIFEPYEVGTIMPNIAQIGLGLAFCKMMSEAHGGAITVQDNQPRGAMFSLTLPQHPPVPFGWMPHDQWRGAAVDIGK