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Details for slr1302

ORF slr1302
Accession NP_440175.1
Symbol cupB
Category Other
Definition protein involved in constitutive low affinity CO2 uptake
Regulatory function No
External resources CyanoBase, KEGG, NCBI

Promoter profile

Table filtering
Motif Direction Start Stop Central FIMO score FIMO q-value
NP_442711.1_1 Forward -57 -43 11.3077 0.249
NP_441061.1_3 Forward -34 -15 16.6165 0.154
NP_441480.1_5 Forward -63 -44 13.8641 0.169
NP_440817.1_8 Reverse -316 -335 19.5296 0.24
NP_442173.1_1 Forward -88 -80 5.0343 0.24
NP_442173.1_1 Reverse -117 -125 4.73931 0.258
NP_441812.1_1 Forward -337 -323 15.1419 0.201
NP_441859.1_3 Forward -269 -250 3.63691 0.238
NP_441043.1_1 Forward -275 -256 14.9449 0.286
NP_440304.1_4 Reverse -1 -11 3.81494 0.292
NP_440893.1_3 Reverse -258 -277 3.83357 0.262
NP_442196.1_10 Forward -337 -318 11.7008 0.224
NP_439957.1_10 Forward -321 -311 18.4663 0.171
NP_441434.1_1 Reverse -208 -222 7.93745 0.26
NP_441955.1_8 Forward -169 -152 12.4285 0.199
NP_441955.1_8 Reverse -12 -29 9.08529 0.258
NP_442889.1_8 Reverse -127 -141 12.782 0.0599
NP_441792.1_5 Reverse -43 -59 10.5799 0.223
NP_441327.1_1 Forward -313 -294 3.34839 0.277
NP_441163.1_4 Forward -90 -71 11.8555 0.297
NP_440944.1_2 Forward -188 -169 -2.36049 0.272
NP_441695.1_6 Reverse -114 -133 19.469 0.202
NP_441316.1_7 Forward -343 -328 -0.118434 0.199
NP_442530.1_2 Reverse -203 -213 14.0414 0.219
NP_441388.1_10 Forward -330 -313 17.3616 0.143
NP_441950.1_7 Forward -53 -34 -1.57384 0.194
NP_442198.1_8 Forward -183 -164 17.3057 0.157
NP_440984.1_7 Reverse -156 -170 11.7993 0.122
NP_442571.1_9 Reverse -315 -334 12.7825 0.183
NP_441591.1_10 Forward -165 -146 19.469 0.0411
NP_441099.1_10 Reverse -203 -213 17.1874 0.254
NP_441294.1_7 Reverse -31 -45 8.67469 0.289
NP_442575.1_8 Forward -352 -333 -4.6221 0.263
NP_440867.1_10 Reverse -143 -162 1.57275 0.294
NP_442215.1_2 Reverse -128 -144 -7.51295 0.297
NP_440929.1_8 Forward -341 -332 3.63797 0.214
NP_441762.1_7 Forward -28 -16 -3.99259 0.148
NP_442142.1_4 Forward -259 -246 3.85363 0.243
NP_440919.1_7 Reverse -262 -280 9.69284 0.193
NP_440357.1_3 Forward -270 -251 6.68596 0.236
NP_440464.1_10 Reverse -12 -22 14.1541 0.169
NP_442063.1_8 Reverse -103 -122 16.7157 0.154
NP_441612.1_2 Forward -226 -216 6.80666 0.277
NP_442808.1_1 Reverse -267 -277 1.84789 0.281
NP_440558.1_2 Forward -83 -64 -7.37537 0.293
NP_441878.1_6 Forward -342 -332 -7.78811 0.266
NP_442469.1_7 Reverse -105 -124 21.2389 0.149
NP_441633.1_3 Reverse -33 -46 0.215946 0.13
NP_442998.1_10 Reverse -156 -163 4.07068 0.276
NP_442802.1_4 Forward -341 -322 19.664 0.154
NP_440164.1_1 Forward -265 -246 3.44104 0.26
NP_440215.1_10 Reverse -323 -342 15.5357 0.196
NP_440243.1_1 Reverse -207 -226 20.7691 0.1
NP_442054.1_3 Reverse -39 -58 -5.9004 0.297
NP_441271.1_9 Reverse -122 -141 9.73422 0.289
NP_440146.1_1 Forward -222 -204 16.2356 0.166
NP_441676.1_9 Reverse -46 -63 13.4111 0.253
NP_442240.1_2 Forward -30 -11 -12.6852 0.163
NP_442714.1_5 Forward -276 -257 1.86774 0.238
NP_442950.1_1 Forward -223 -204 -6.09707 0.3
NP_439984.1_5 Forward -46 -27 17.109 0.207
NP_440398.1_6 Reverse -11 -30 4.22769 0.282
NP_441877.1_5 Forward -281 -262 -0.0988766 0.276
NP_440344.1_10 Reverse -11 -28 -12.2525 0.246
NP_440189.1_5 Forward -322 -303 19.6648 0.196
NP_440350.1_5 Reverse -316 -335 -0.590531 0.187
NP_440350.1_5 Reverse -298 -317 -6.58872 0.296
NP_441896.1_3 Reverse -71 -90 2.85105 0.183
NP_440894.1_10 Forward -165 -146 3.14605 0.278
NP_440999.1_9 Reverse -44 -58 0.687908 0.177
NP_440888.1_2 Forward -37 -23 8.84875 0.145
NP_442892.1_9 Reverse -301 -315 13.5686 0.293
NP_440052.1_5 Reverse -105 -124 2.3594 0.165
NP_440575.1_1 Reverse -304 -323 3.04693 0.256
NP_442337.1_8 Forward -288 -269 4.81767 0.21
NP_442204.1_1 Reverse -18 -29 10.2851 0.0736
NP_440673.1_3 Forward -254 -247 9.08556 0.202
NP_441884.1_9 Forward -166 -147 -18.9784 0.143
NP_442412.1_5 Reverse -225 -244 1.27776 0.295
NP_441086.1_3 Forward -312 -293 6.23263 0.278
NP_442366.1_3 Forward -147 -129 -0.0791831 0.183
NP_442694.1_9 Forward -214 -195 10.0292 0.24
NP_442515.1_1 Reverse -34 -48 3.34284 0.12
NP_441396.1_5 Forward -26 -17 7.37455 0.279
NP_440877.1_6 Reverse -258 -277 17.8957 0.27
NP_439950.1_1 Forward -187 -178 13.2744 0.277
NP_441663.1_8 Reverse -99 -118 -1.08219 0.239
NP_440526.1_3 Reverse -39 -50 5.76138 0.233
NP_442320.1_8 Reverse -110 -124 -5.01529 0.2
NP_441732.1_2 Reverse -24 -40 -17.4444 0.258
NP_440497.1_6 Forward -32 -13 -7.4737 0.292
NP_440578.1_8 Forward -53 -34 11.9958 0.246
NP_441805.1_1 Forward -324 -305 -4.13045 0.227
NP_441805.1_1 Forward -229 -210 -6.09707 0.3
NP_440281.1_6 Forward -267 -248 8.16093 0.289
NP_442489.1_2 Forward -181 -162 4.03102 0.227
NP_441040.1_2 Reverse -75 -94 -12.9802 0.267
NP_439956.1_7 Forward -384 -365 3.04771 0.262
NP_440352.1_5 Forward -313 -294 11.4877 0.257
NP_440831.1_5 Forward -126 -107 15.4039 0.299
NP_440010.1_10 Reverse -219 -238 1.76941 0.293
NP_441047.1_2 Forward -94 -75 -0.885524 0.267
NP_441329.1_3 Forward -210 -200 12.0145 0.273
NP_441329.1_6 Forward -318 -299 2.05265 0.231
NP_440671.1_4 Forward -95 -81 11.0127 0.142
NP_440772.1_8 Forward -169 -150 9.93088 0.253
NP_440875.1_9 Forward -137 -127 10.5134 0.212
NP_440590.1_4 Forward -26 -13 -5.88057 0.293
NP_440567.1_1 Reverse -333 -347 -0.492064 0.287
NP_442643.1_1 Forward -63 -44 -3.83545 0.223
NP_440900.1_5 Forward -49 -30 15.0503 0.28
NP_442787.1_9 Forward -63 -44 16.6174 0.226
NP_442402.1_4 Reverse -190 -209 1.47364 0.173
NP_442402.1_4 Forward -396 -377 -7.96609 0.278
NP_441848.1_4 Forward -309 -293 12.1343 0.211
NP_441084.1_6 Forward -261 -247 9.34412 0.287
NP_441811.1_8 Forward -50 -36 6.58777 0.267
NP_440753.1_5 Forward -133 -114 16.0274 0.122
NP_441028.1_6 Reverse -314 -324 5.38779 0.255
NP_440721.1_5 Reverse -36 -55 6.78348 0.28
NP_441527.1_4 Forward -317 -298 -8.54695 0.247
NP_442728.1_7 Forward -160 -146 17.5025 0.171
NP_441059.1_2 Forward -206 -187 -5.9004 0.262
NP_441815.1_6 Reverse -216 -235 2.85027 0.226
NP_442674.1_2 Reverse -202 -221 9.43923 0.216
NP_441809.1_7 Forward -384 -365 8.06259 0.2
NP_440886.1_7 Reverse -34 -44 4.01116 0.255
NP_440664.1_9 Forward -267 -248 7.96426 0.289
NP_441463.1_3 Forward -266 -247 -4.6221 0.209
NP_442842.1_10 Reverse -307 -326 1.53328 0.254
NP_442362.1_8 Reverse -223 -242 17.109 0.19
NP_442209.1_5 Forward -51 -32 17.6042 0.242
NP_441993.1_1 Forward -153 -134 3.11618 0.241
NP_440143.1_8 Reverse -29 -48 14.7483 0.273
NP_440358.1_8 Reverse -319 -338 0.196116 0.263
NP_440467.1_3 Reverse -333 -352 11.1586 0.284
NP_440737.1_1 Forward -153 -134 4.916 0.278
NP_440766.1_5 Forward -274 -262 16.632 0.158
NP_442514.1_5 Forward -239 -220 -5.31116 0.257
NP_442703.1_9 Forward -313 -295 4.6407 0.248
NP_442341.1_7 Reverse -153 -167 1.86788 0.278
NP_441173.1_9 Reverse -265 -273 12.1137 0.21
NP_440750.1_6 Forward -326 -307 7.30471 0.296
NP_440275.1_3 Reverse -78 -88 2.24165 0.269
NP_443060.1_1 Reverse -24 -43 12.6833 0.166
NP_443060.1_5 Forward -45 -26 7.37347 0.227
NP_439962.1_4 Reverse -336 -355 -5.01543 0.272
NP_440175.1_7 Forward -74 -56 9.46071 0.28
NP_440216.1_6 Forward -38 -22 5.46674 0.189
NP_440172.1_1 Reverse -3 -13 1.94665 0.29
NP_442371.1_1 Forward -16 -6 13.1559 0.21
NP_441485.1_2 Forward -374 -355 10.7175 0.274
NP_440416.1_9 Forward -38 -19 -18.1918 0.253
NP_443052.1_8 Reverse -120 -139 -11.9969 0.244
NP_443052.1_9 Reverse -99 -118 -2.85214 0.242
NP_443052.1_9 Forward -171 -152 -3.73712 0.251
NP_443052.1_9 Forward -241 -222 -6.98204 0.291
NP_442154.1_1 Forward -55 -37 -18.8604 0.286
NP_440988.1_10 Reverse -26 -40 5.38289 0.243
Motif Direction Start Stop Central FIMO score FIMO q-value

Expression profile

Sequences

Promoter

GGAAATTGACGACAGTATTCCCAACATTGATTTGGATCCGGTTATCCAACAATTGGAGGGGCGCAAGCATAAACTCCAGGAGGAAAAAAATAAGCTGGAACAAAATTTGCAGTCCACTAGGCAGGGTTTGGCAGAAATTGAAACCATGATTGCTAGTCTCGACCAGCAGTACCAGGCGAAAAAGACTAATTTTGAGCAAAACCGTCGGGAAGTGGAAGATTTACAGAAACAGACAGCGGCGCTAGAAGCCCAGGGTCGTTTGTTGAGGGCAGCTTTGCAACCTCTGCAGGATCAGTTGGATGTAATGAAACCCCGGTTGCAGGAAATGCAGACCCTATTGTTTGGCGGTTAGTTGGGTTGGTTGCCGACTTCCATCGATTGGGGCTGAAGAAATTTCCTT

CDS

GTGCCCTGGCATTCTGGCCTGGATTGCTGGGATAATGGCCTCTATTATGGGCTTTTGTATCGAAACCATAGTTCTGAAGTTATGACCCAAACCTCCCTCGCCCCGTCCCGTCATCCCCTCAGAGGATATATTCAAAATCTAGAGGCGGGGCAGGCCCTGTTGGTGGATTCCCCGGCTAACACGCTGGAAGTGGTGGGCATCCTCAAAAGCTATGGTGTGATCCTCGATGCCTATTCCATCAATCTGCAACACATTGCCCATACCCAGTATCTGAAGTTATTTCCCTTTTTTAAATATTTCAACGGTAATGTCAATGGCGATCGCCTATTGAAACATTGGTGGCACAATCGCATTAACTACGAGTATGCAGAATATTGCATGAAGGCAATGATGTGGCATGGAGGGGGAAAATTGGATGAATATCTAGACAGTGCCGAGTTTAAAGCCAATGTTAAAAAGTTAATTAAAGCGAAAATCAAAGGCAATCCTTTTTTGCAATTACTTAACCAGATTTTTCCCGAATTTTTGCCGGAACAAATGCGAATGATGGCCTATTATTCCGCCTTGGGTCAATTCTGGCGGGTGATGGCGGATATGTTTTTGAATTTATCTGACCGCCATGACCGGGGAGAAATCAAAACCATTCCTGATGTGGTGCAACATATCCAAGACGGCCTAGTGGCCGATGCCGCCCGCCCCATTATTTACCGGGTGGAGTTGGGGGGAACTACCTACGATGTTTTGCCCCCCAGTGCCAATTTAGCTTTTTTGATGGAAACCGCAGTGCCCTACGTGGAGGCGGTGTTTTTCCGGGGTACTCCTTTCCCTGGCACCATTTCCTACAATGCCCAAGCGGGACAGATTCCCCCTGACCAAAGCCTGTTTACCTATGGGGCCCTCTATGCCGATCCCCTCCCCGTTGGTGGAGCTGGCATTCCCCCCACCTTGCTAATGCAGGATATGCGCCACTTTTTGCCGGACTATCTCCGACGGGTTTATCAGGCATCCCTACGGCAGGAAGGGGATTTACTGGTGCAAATTTGTGAAAGTTTTCAAAAATCAATGTTTTGTGTCACCACCGCGGCCATTCGTGGTTTAGCACCCTATCCCCTGGAGACCGATAATCCCCAGGAACAGGAGACTAACCGAGCTTACCTGGAAAGTTGGATGAATCGTTTTCTCACTTCCCGGGTGGAGATTATTAACCAACCCTCAACCATGGCCGATTAG

Protein

MPWHSGLDCWDNGLYYGLLYRNHSSEVMTQTSLAPSRHPLRGYIQNLEAGQALLVDSPANTLEVVGILKSYGVILDAYSINLQHIAHTQYLKLFPFFKYFNGNVNGDRLLKHWWHNRINYEYAEYCMKAMMWHGGGKLDEYLDSAEFKANVKKLIKAKIKGNPFLQLLNQIFPEFLPEQMRMMAYYSALGQFWRVMADMFLNLSDRHDRGEIKTIPDVVQHIQDGLVADAARPIIYRVELGGTTYDVLPPSANLAFLMETAVPYVEAVFFRGTPFPGTISYNAQAGQIPPDQSLFTYGALYADPLPVGGAGIPPTLLMQDMRHFLPDYLRRVYQASLRQEGDLLVQICESFQKSMFCVTTAAIRGLAPYPLETDNPQEQETNRAYLESWMNRFLTSRVEIINQPSTMAD