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Details for slr0898

ORF slr0898
Accession NP_442378.1
Symbol nirA
Category Glutamate family / Nitrogen assimilation
Definition ferredoxin--nitrite reductase
Regulatory function No
External resources CyanoBase, KEGG, NCBI

Promoter profile

Table filtering
Motif Direction Start Stop Central FIMO score FIMO q-value
NP_442100.1_1 Forward -274 -255 12.6523 0.146
NP_442291.1_5 Forward -297 -281 -4.1697 0.266
NP_440897.1_6 Reverse -216 -235 -4.52452 0.28
NP_441453.1_7 Reverse -365 -372 11.6422 0.298
NP_441960.1_3 Forward -95 -76 13.1279 0.291
NP_441098.1_3 Forward -133 -114 -4.39637 0.28
NP_440074.1_6 Forward -277 -258 11.11 0.268
NP_440304.1_4 Forward -329 -319 2.33998 0.299
NP_441781.1_7 Reverse -318 -337 -3.24547 0.295
NP_440916.1_1 Reverse -285 -299 10.4227 0.206
NP_440916.1_1 Reverse -214 -228 8.06273 0.28
NP_442602.1_2 Forward -327 -308 -1.7705 0.296
NP_441925.1_4 Forward -327 -308 -2.36125 0.166
NP_440769.1_8 Forward -136 -117 10.1275 0.188
NP_442136.1_1 Reverse -47 -66 9.83255 0.226
NP_440178.1_7 Reverse -318 -337 -12.0953 0.112
NP_441716.1_2 Forward -148 -129 3.73847 0.229
NP_441327.1_1 Forward -137 -118 7.86553 0.227
NP_443017.1_1 Forward -65 -46 14.7394 0.274
NP_442848.1_1 Reverse -18 -32 0.687908 0.263
NP_442485.1_2 Forward -336 -317 9.53756 0.288
NP_440184.1_1 Forward -65 -46 8.04414 0.155
NP_440184.1_1 Reverse -49 -68 4.21601 0.227
NP_442300.1_5 Forward -163 -144 11.2092 0.282
NP_442057.1_5 Forward -285 -267 13.2599 0.229
NP_442685.1_2 Reverse -117 -127 14.533 0.235
NP_442690.1_1 Reverse -115 -134 0.294447 0.126
NP_442690.1_1 Reverse -255 -274 -6.88371 0.169
NP_442690.1_1 Forward -74 -55 -10.0303 0.209
NP_442690.1_1 Forward -289 -270 -12.6852 0.247
NP_442690.1_1 Reverse -40 -59 -16.6185 0.29
NP_442002.1_1 Forward -345 -327 -6.56903 0.249
NP_440206.1_9 Reverse -292 -311 9.0459 0.272
NP_441041.1_4 Reverse -169 -188 -13.7669 0.295
NP_440260.1_7 Reverse -311 -330 9.53756 0.152
NP_442281.1_1 Reverse -73 -87 4.62054 0.187
NP_441079.1_7 Reverse -230 -249 4.81688 0.152
NP_441079.1_7 Reverse -245 -264 -6.19614 0.273
NP_442500.1_8 Forward -357 -343 18.9514 0.103
NP_440498.1_1 Forward -337 -319 0.314141 0.218
NP_442982.1_5 Forward -338 -319 5.50599 0.157
NP_442142.1_4 Forward -320 -307 7.00021 0.151
NP_440158.1_1 Forward -129 -110 11.6973 0.206
NP_440158.1_1 Forward -269 -250 11.0289 0.227
NP_441198.1_5 Forward -31 -18 19.0949 0.206
NP_441876.1_9 Forward -212 -202 11.2876 0.278
NP_441764.1_4 Reverse -47 -64 10.0772 0.27
NP_442719.1_2 Forward -133 -115 -8.33968 0.247
NP_441612.1_2 Forward -296 -286 12.325 0.21
NP_442808.1_1 Forward -318 -308 3.51951 0.238
NP_441849.1_2 Forward -262 -243 2.14815 0.245
NP_440558.1_2 Reverse -75 -94 -4.22878 0.243
NP_440558.1_2 Reverse -321 -340 -6.29373 0.273
NP_442792.1_5 Forward -92 -75 13.8052 0.261
NP_441878.1_6 Reverse -318 -328 -7.29646 0.217
NP_441878.1_6 Forward -335 -325 -7.68978 0.255
NP_441557.1_8 Reverse -326 -336 12.2709 0.236
NP_441520.1_3 Reverse -350 -368 16.9321 0.0371
NP_441445.1_1 Reverse -302 -321 0.0977854 0.283
NP_441590.1_2 Reverse -197 -210 18.0139 0.295
NP_440084.1_8 Reverse -249 -263 10.8022 0.26
NP_442347.1_2 Reverse -288 -297 4.71961 0.266
NP_441728.2_4 Forward -134 -115 13.4162 0.247
NP_440899.1_8 Forward -286 -267 -5.11376 0.231
NP_440709.1_1 Forward -133 -114 5.11187 0.178
NP_440456.1_7 Reverse -205 -219 10.816 0.285
NP_441270.1_5 Reverse -304 -323 10.8472 0.296
NP_440525.1_1 Reverse -112 -131 12.5858 0.224
NP_440915.1_6 Reverse -315 -329 -1.27871 0.229
NP_441866.1_4 Forward -285 -272 12.4668 0.282
NP_441464.1_10 Reverse -306 -320 9.93102 0.262
NP_440695.1_6 Forward -61 -47 12.2535 0.264
NP_440695.1_6 Forward -126 -112 10.3144 0.268
NP_442993.1_1 Reverse -319 -335 -13.0195 0.283
NP_440677.1_1 Reverse -131 -150 9.3409 0.187
NP_442386.1_9 Reverse -77 -86 11.1107 0.103
NP_441271.1_8 Forward -85 -75 16.4996 0.229
NP_440027.1_3 Forward -327 -309 7.58986 0.208
NP_439984.1_1 Forward -268 -249 9.71588 0.292
NP_442294.1_3 Forward -222 -208 12.0937 0.29
NP_440372.1_3 Forward -246 -232 17.2957 0.165
NP_442114.1_8 Reverse -269 -283 8.06211 0.234
NP_442085.1_3 Reverse -54 -73 11.5064 0.244
NP_441877.1_9 Reverse -47 -64 4.85706 0.284
NP_440531.1_6 Forward -208 -189 -2.75381 0.258
NP_441335.1_8 Reverse -307 -326 9.83255 0.228
NP_442556.1_10 Forward -285 -266 8.63983 0.284
NP_440350.1_10 Forward -197 -183 20.0584 0.201
NP_441896.1_1 Reverse -113 -132 14.6499 0.108
NP_442378.1_1 Forward -74 -57 17.0501 0.22
NP_442378.1_2 Forward -52 -33 19.5673 0.0569
NP_440600.1_1 Forward -130 -111 12.1748 0.296
NP_441543.1_2 Forward -295 -286 5.89959 0.169
NP_442710.1_7 Reverse -247 -266 -5.39666 0.29
NP_442578.1_7 Forward -295 -288 9.38056 0.138
NP_443062.1_1 Reverse -169 -187 5.32818 0.231
NP_440519.1_8 Reverse -160 -176 0.845183 0.298
NP_440255.1_3 Reverse -118 -128 14.4405 0.298
NP_442780.1_3 Reverse -114 -133 7.59119 0.269
NP_442120.1_10 Forward -99 -80 2.45773 0.15
NP_441884.1_2 Reverse -266 -280 15.7678 0.239
NP_441884.1_9 Forward -329 -310 -23.01 0.284
NP_442813.1_2 Forward -229 -210 -0.0988766 0.273
NP_442813.1_4 Reverse -355 -374 0.982764 0.197
NP_442206.1_7 Reverse -317 -336 9.73422 0.295
NP_442939.1_4 Reverse -252 -270 15.653 0.294
NP_441555.1_5 Reverse -146 -165 16.2232 0.245
NP_441157.1_1 Forward -130 -116 6.88214 0.187
NP_442700.1_4 Forward -198 -179 -2.45882 0.294
NP_442689.1_8 Reverse -44 -61 5.74204 0.155
NP_442689.1_8 Forward -70 -53 -1.0428 0.206
NP_442689.1_8 Reverse -119 -136 -6.25434 0.28
NP_441124.1_5 Forward -128 -118 13.6766 0.215
NP_441031.1_1 Forward -70 -51 21.1873 0.0387
NP_441031.1_1 Reverse -44 -63 4.60539 0.288
NP_441031.1_1 Forward -135 -116 3.93054 0.293
NP_440195.1_4 Reverse -12 -31 5.80098 0.284
NP_440483.1_1 Forward -373 -354 -8.752 0.295
NP_441570.1_1 Forward -296 -278 -17.5821 0.283
NP_440707.1_9 Forward -208 -189 1.0811 0.292
NP_442443.1_4 Forward -105 -95 12.9592 0.275
NP_441333.1_1 Forward -285 -275 12.8292 0.221
NP_441022.1_1 Reverse -299 -308 13.7524 0.188
NP_441022.1_1 Forward -265 -256 13.6565 0.202
NP_441022.1_1 Reverse -255 -264 11.1625 0.284
NP_441040.1_2 Reverse -355 -374 -11.7019 0.255
NP_442849.1_1 Reverse -206 -220 9.5377 0.241
NP_440335.1_9 Reverse -266 -284 14.8671 0.193
NP_440250.1_4 Reverse -41 -60 11.3067 0.208
NP_440847.1_3 Reverse -326 -340 14.9452 0.188
NP_441895.1_2 Reverse -292 -311 -8.26035 0.166
NP_440671.1_1 Reverse -252 -271 10.2463 0.191
NP_440671.1_1 Reverse -47 -66 4.79121 0.267
NP_442199.1_7 Forward -177 -158 -0.591301 0.3
NP_441813.1_7 Forward -320 -306 10.717 0.23
NP_442105.1_9 Reverse -200 -214 15.7108 0.263
NP_442105.1_9 Forward -320 -306 14.0605 0.294
NP_440219.1_7 Forward -310 -291 15.2408 0.226
NP_441508.1_1 Reverse -50 -69 15.3631 0.107
NP_441508.1_1 Forward -139 -120 10.4615 0.291
NP_441249.1_1 Reverse -317 -336 6.19431 0.197
NP_442402.1_4 Forward -224 -205 -9.83437 0.293
NP_442402.1_10 Forward -323 -313 11.4843 0.251
NP_441848.1_6 Forward -209 -190 13.6666 0.288
NP_441848.1_7 Forward -310 -291 5.50519 0.209
NP_442679.1_1 Reverse -266 -285 3.53937 0.147
NP_442786.1_1 Forward -74 -55 18.3873 0.192
NP_440160.1_5 Reverse -291 -301 15.5158 0.267
NP_442532.1_4 Reverse -232 -250 7.96493 0.289
NP_442533.1_1 Reverse -302 -321 -15.0452 0.248
NP_442229.1_1 Forward -89 -75 6.98048 0.2
NP_441482.1_7 Reverse -78 -92 -11.4068 0.262
NP_441028.1_6 Reverse -354 -364 6.86274 0.23
NP_441028.1_6 Forward -213 -203 4.30615 0.278
NP_441527.1_7 Forward -321 -302 8.75009 0.282
NP_441106.1_3 Reverse -46 -65 18.289 0.0587
NP_441106.1_3 Reverse -111 -130 14.8474 0.157
NP_441106.1_3 Forward -68 -49 10.7175 0.245
NP_441186.1_4 Forward -269 -259 16.9908 0.223
NP_442683.1_1 Forward -262 -244 21.2855 0.0994
NP_439899.1_1 Reverse -46 -64 3.40863 0.299
NP_441463.1_2 Reverse -120 -138 9.88553 0.138
NP_441431.1_2 Reverse -75 -89 11.1104 0.146
NP_441993.1_1 Reverse -319 -338 2.43397 0.259
NP_439988.1_10 Reverse -51 -70 6.04041 0.286
NP_442930.1_1 Forward -290 -280 9.22267 0.289
NP_440457.1_1 Forward -338 -326 -0.256015 0.259
NP_442582.1_3 Forward -134 -120 17.3912 0.127
NP_442439.1_8 Reverse -286 -305 9.63589 0.253
NP_442862.1_3 Reverse -303 -320 6.72535 0.263
NP_441173.1_9 Forward -130 -122 10.6388 0.261
NP_441397.1_8 Reverse -205 -218 14.0036 0.221
NP_439962.1_4 Reverse -331 -350 -6.88371 0.285
NP_441105.1_3 Forward -98 -79 -10.0303 0.3
NP_441730.1_2 Reverse -118 -136 7.09898 0.288
NP_440216.1_9 Reverse -80 -89 6.98123 0.289
NP_440172.1_3 Forward -240 -221 11.1109 0.287
NP_442116.1_6 Reverse -120 -137 8.35994 0.253
NP_442116.1_6 Reverse -54 -71 5.87715 0.289
NP_442154.1_1 Reverse -300 -318 -19.1554 0.291
Motif Direction Start Stop Central FIMO score FIMO q-value

Expression profile

Sequences

Promoter

TTGAATGCTTTACCTGGTATTTCAGCGCCCCAAGGGATGTAGGAAAACAAGCTCAGAATGCTGCGGGGAGAAGGGCAACTCCCCACCAGCCCCAAATTTTTGCTGGCGATAAATATTTTTCGGTTTAATTGTTCACAAAGCTTTTTGAATTTGAGTTTATAGAAATTTATTGGCTGGTAATGCTTTTTTGCCCCCCTGCAGGACTTCATTGATCCTTGCCTATACCATCAATATCATTGGTCAATAATGATGATGATTGACTAAAACATGTTTAACAAAATTTAACGCATATGCTAAATGCGTAAACTGCATATGCCTTGGCTGAGTGTAATTTACGTTACAAATTTTAACGAAACGGGAACCCTATATTGATCTCTACTGTTATCTGGCTTGAAGCGTT

CDS

GTGGCTAATAAATTTGAGACCGTTAAGGCAACCAAAGATGGTTTGGCTGTCCGGGCTGAGTTGGAACATTTTGCCCAGATTGGTTGGGAAAATATCCCCGAAGAGGACCGGGATCTGCGCTTGAAGTGGTTAGGCATTTTTTTCCGCCCTGTCACCCCCGGCGAGTTTATGCTCCGTTTTCGTATTCCCCACGGCTTGCTCACCAGTCAGCAATTACAGGTCATTGGCGACATTATTAACCGCTACGGCGATCGGGGCAATGGGGACATCACCACCAGGCAAAATTTGCAGGTCCGGGGCATCAAAATTGAAGATATTCCCGATATTTTTAGCAAGCTGGAAAGCTGTGGTCTAACCTCGGTCCAGTCCGGCATGGATAATGTCCGTAACATCACAGGCTCTCCGGTGGCAGGGTTGGAAAAAGATGAATTGATTGATACCAGAGACCTGGTGCAAGGGGTACAGGACATGATCACCAATGGTGGTCGGGGCAATCCGGAATTCACCAACTTGCCCAGGAAGTTTAACATTGCCATCGAAGGAAGCCGGGATAATTCTGTCCACGCAGAAATTAACGACGTGGCTTTTGTCCCAGCCTATCGGGAGGGAATTCTCGGTTTTAACGTAGTGGTGGGGGGCTTTTTCTCTTCCCGTCGTTGTGAAGCCGCTATTCCCCTCGATGCTTGGGTGCAACCGGATCAGCAGGTGGTGGATTTATGCCGTTCTATCTTGGAAATTTACCGTGACCATGGTCTGCGGGCTAACCGTCAAAAGTCCCGCCTAATGTGGCTAATTGATGAATGGGGGGTGGCTAAATTCCGGGAAGAAGTGGCCGCTAAGTTGCCTTTCCCTCTGTTAACAGCGGCTCCTAAGGACGAATTAGATTGGGATAAGCGAGATCATTTAGGGGTTCATCCCCAGAAACAAGCCGGGTTAAATTACGTGGGTCTCCATGTGCCGGTGGGCCGTCTCTATGCCAATGACTTTTTTGAACTCTCCCGTTTAGCAGATACCTATGGAAGTGGGGAAGTGCGGCTGACGGTGGAACAGAATTTAATTTTGGTCAATGTCCCTGACGAAAAACTGGAGGCTTTGTTGGCGGAACCGTTATTAACTAAGTTTCGAGTTGACCCCCACAATCTGCAACGGTCAGTGGTGTCCTGTACGGGGGCGCAGTTTTGCAAGTTTGCCTTGATTGAAACAAAAAATCGAGCTTTGGCCATGGTGGCGGCTTTGGAAAAAGAGTTGACGGTGCCTAAGCCCGTGCGGATCCACTGGACTGGATGTCCCAATTCCTGTGGCCAACCCCAGGTGGCGGACATTGGCCTGATGGGAACCAAAGTGCGGAAAGATGGCAAAACAGTGGATGGTGCCGATGTTTATCTGGGGGGAAAAGTGGGTAAGGATGCCCATTTGGGTACCTGTGTCCATAAGAGTATTCCCTGTGATGAACTGCAGCCTTTGTTAGCTCAGATTTTGATTGAACAATTTGGCGCTGTGCGGCGTTGA

Protein

MANKFETVKATKDGLAVRAELEHFAQIGWENIPEEDRDLRLKWLGIFFRPVTPGEFMLRFRIPHGLLTSQQLQVIGDIINRYGDRGNGDITTRQNLQVRGIKIEDIPDIFSKLESCGLTSVQSGMDNVRNITGSPVAGLEKDELIDTRDLVQGVQDMITNGGRGNPEFTNLPRKFNIAIEGSRDNSVHAEINDVAFVPAYREGILGFNVVVGGFFSSRRCEAAIPLDAWVQPDQQVVDLCRSILEIYRDHGLRANRQKSRLMWLIDEWGVAKFREEVAAKLPFPLLTAAPKDELDWDKRDHLGVHPQKQAGLNYVGLHVPVGRLYANDFFELSRLADTYGSGEVRLTVEQNLILVNVPDEKLEALLAEPLLTKFRVDPHNLQRSVVSCTGAQFCKFALIETKNRALAMVAALEKELTVPKPVRIHWTGCPNSCGQPQVADIGLMGTKVRKDGKTVDGADVYLGGKVGKDAHLGTCVHKSIPCDELQPLLAQILIEQFGAVRR