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Welcome to Synergy

This is a set of tools for exploring the gene regulation in the cyanobacterium Synechocystis. To get started, go to the Gene search tool and find your favorite gene, or maybe upload a list of differentially expressed genes. From there you can explore the co-expression network of those genes, perform Gene Ontology (GO) and motif enrichment and get more detailed information about the genes and motifs found.

Below you can find a video describing case study 2 from our paper (Mähler et al. (2014). Synergy: A web resource for exploring gene regulation in Synechocystis sp. PCC6803. PLOS ONE 9(11):e113496). It describes how you can perform an integrated analysis of both regulatory motifs and co-expression.

For more examples, please see the Typical workflows section of the documentation.